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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • cytosol 2
  • mitochondrion 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid, secretory
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
Predotar:secretory
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d003298_P001
Zm00001d004087_P001
Zm00001d004855_P002
Zm00001d007792_P001
Zm00001d008517_P001
Zm00001d008746_P001
Zm00001d008768_P001
Zm00001d009747_P001
Zm00001d010159_P002
Zm00001d011086_P005
Zm00001d011087_P001
Zm00001d011131_P001
Zm00001d011132_P001
Zm00001d011202_P002
Zm00001d012277_P001
Zm00001d013141_P001
Zm00001d014053_P001
Zm00001d016508_P001
Zm00001d016605_P001
Zm00001d019396_P001
Zm00001d019635_P001
Zm00001d029295_P001
Zm00001d029656_P003
Zm00001d034024_P001
Zm00001d034326_P001
Zm00001d034421_P004
Zm00001d034761_P002
Zm00001d035720_P002
Zm00001d035722_P007
Zm00001d038078_P001
Zm00001d038846_P001
Zm00001d039163_P002
Zm00001d040038_P001
Zm00001d042097_P001
Zm00001d042731_P002
Zm00001d044301_P001
Zm00001d047714_P001
Zm00001d053177_P004

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G49240.1 Zm00001d009747_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d011131_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d011132_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d011202_P002 AT1G72770.1 19033529
AT1G49240.1 Zm00001d038846_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d039163_P002 AT1G72770.1 19033529
AT1G49240.1 Zm00001d044301_P001 AT1G72770.1 19033529
AT5G09810.1 Zm00001d013141_P001 AT2G31200.1 21798944
AT5G09810.1 Zm00001d029656_P003 AT2G31200.1 21798944
AT5G09810.1 Zm00001d034024_P001 AT2G31200.1 21798944
AT5G09810.1 Zm00001d034326_P001 AT2G31200.1 21798944
AT5G09810.1 Zm00001d008517_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d008768_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d014053_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d029295_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d038078_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d040038_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d042097_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d047714_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d003298_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d004087_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d004855_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d007792_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d008746_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d010159_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d011086_P005 AT5G09810.1 21798944
AT5G09810.1 Zm00001d011087_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d012277_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d016508_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d016605_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d019396_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d019635_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d034421_P004 AT5G09810.1 21798944
AT5G09810.1 Zm00001d034761_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d035720_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d035722_P007 AT5G09810.1 21798944
AT5G09810.1 Zm00001d042731_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d053177_P004 AT5G09810.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d011086_P005 Maize cytosol 83.04 100.0
KXG21029 Sorghum cytosol 83.04 100.0
Zm00001d035720_P002 Maize cytosol 83.04 100.0
Zm00001d035722_P007 Maize plasma membrane 84.14 99.22
Os05t0106600-01 Rice nucleus 82.16 98.94
TraesCS1D01G020000.1 Wheat cytosol 81.72 98.41
TraesCS1B01G024500.1 Wheat golgi, nucleus 81.72 98.41
KRH43389 Soybean cytosol 81.06 97.61
KRH64098 Soybean cytosol 81.06 97.61
KRH59535 Soybean cytosol 81.06 97.61
KRH53856 Soybean endoplasmic reticulum, mitochondrion 71.37 97.59
VIT_12s0178g00200.t01 Wine grape cytosol 80.84 97.35
Zm00001d013873_P001 Maize plasma membrane, plastid 80.84 97.35
Zm00001d053177_P004 Maize cytosol 80.84 97.35
AT5G09810.1 Thale cress cytosol 80.84 97.35
Solyc03g078400.2.1 Tomato nucleus, plastid 80.62 97.08
CDX69885 Canola cytosol 80.62 97.08
PGSC0003DMT400047481 Potato cytosol 80.62 97.08
CDY21607 Canola cytosol 80.62 97.08
Zm00001d032480_P002 Maize plasma membrane, plastid 80.62 97.08
CDX85794 Canola cytosol 75.33 96.88
CDY30296 Canola cytosol 75.33 96.88
CDY31972 Canola cytosol 75.33 96.88
CDY40061 Canola cytosol 75.33 96.88
Bra028615.1-P Field mustard cytosol 80.4 96.82
Bra009081.1-P Field mustard cytosol 75.11 96.6
CDX81140 Canola cytosol 80.18 96.55
Solyc11g005330.1.1 Tomato nucleus 80.18 96.55
CDY56544 Canola cytosol 80.18 96.55
PGSC0003DMT400010174 Potato cytosol 80.18 96.55
Zm00001d033790_P001 Maize cytosol 79.96 96.29
Bra006033.1-P Field mustard cytosol 79.96 96.29
Zm00001d013410_P001 Maize cytosol 79.96 96.29
PGSC0003DMT400076499 Potato cytosol 40.75 95.85
Solyc01g104770.2.1 Tomato nucleus 79.52 95.76
Zm00001d019635_P001 Maize cytosol 29.07 95.65
Zm00001d012277_P001 Maize cytosol 78.41 94.68
KRH10484 Soybean endoplasmic reticulum, mitochondrion, nucleus 78.41 94.43
KRH43946 Soybean endoplasmic reticulum, mitochondrion, nucleus 78.41 94.43
Zm00001d042731_P002 Maize extracellular, plasma membrane, plastid 77.31 93.35
Zm00001d016605_P001 Maize cytosol 32.38 93.04
Zm00001d034761_P002 Maize cytosol 79.96 92.6
Solyc04g071260.2.1 Tomato plastid 76.65 92.31
Zm00001d010159_P002 Maize extracellular, plasma membrane 76.43 92.29
CDX99315 Canola cytosol 64.98 91.33
HORVU1Hr1G002840.6 Barley plasma membrane 81.72 91.15
TraesCS1A01G020500.2 Wheat cytosol 81.72 91.15
Bra022356.1-P Field mustard cytosol 64.76 91.02
AT1G49240.1 Thale cress cytosol 75.55 90.98
AT3G18780.3 Thale cress cytosol 75.33 90.72
CDY61982 Canola cytosol 75.33 90.72
CDY18545 Canola cytosol 75.33 90.72
CDX95498 Canola cytosol 75.33 90.72
CDX82326 Canola cytosol 75.33 90.72
CDX92272 Canola cytosol 75.33 90.72
CDX92271 Canola cytosol 63.0 90.22
KXG21030 Sorghum cytosol 74.67 87.15
PGSC0003DMT400076501 Potato cytosol 38.33 87.0
Zm00001d016508_P001 Maize cytosol 26.21 86.23
Zm00001d008746_P001 Maize cytosol 51.54 85.09
Bra037560.1-P Field mustard cytoskeleton, cytosol 64.32 82.72
VIT_04s0044g00580.t01 Wine grape extracellular 83.26 82.17
Zm00001d019396_P001 Maize cytosol 30.4 82.14
Zm00001d007792_P001 Maize cytosol 46.48 79.92
PGSC0003DMT400087294 Potato mitochondrion 46.92 77.74
Zm00001d003298_P001 Maize cytosol 44.27 76.43
Zm00001d004087_P001 Maize cytosol 34.36 72.22
PGSC0003DMT400022210 Potato cytosol 56.83 70.11
PGSC0003DMT400022205 Potato cytosol 55.73 69.13
PGSC0003DMT400074882 Potato cytosol 55.95 68.65
PGSC0003DMT400074887 Potato cytosol 53.52 65.68
PGSC0003DMT400088088 Potato cytosol 27.31 63.92
Zm00001d004855_P002 Maize cytoskeleton, cytosol, nucleus 80.18 61.69
Zm00001d022558_P001 Maize cytosol 38.77 45.24
Zm00001d034421_P004 Maize plastid 38.55 37.39
Zm00001d027326_P001 Maize cytosol, extracellular, nucleus 34.58 35.44
Zm00001d017106_P001 Maize cytosol 32.38 33.95
Zm00001d049629_P002 Maize nucleus 26.65 32.88
Zm00001d050981_P001 Maize cytosol 32.16 31.81
Zm00001d014112_P003 Maize cytosol 27.97 30.75
Zm00001d024059_P002 Maize cytosol 27.97 29.53
Zm00001d008652_P001 Maize endoplasmic reticulum, plastid 14.1 27.71
Protein Annotations
EntrezGene:100191561EntrezGene:103629275EntrezGene:103629276EntrezGene:103635981MapMan:20.2.1Gene3D:3.30.420.40
Gene3D:3.90.640.10UniProt:A0A1D6FW13ProteinID:AQK95630.1InterPro:ActinInterPro:Actin/actin-like_CSInterPro:Actin_CS
GO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005524PFAM:PF00022PRINTS:PR00190
ScanProsite:PS00406ScanProsite:PS00432ScanProsite:PS01132PANTHER:PTHR11937PANTHER:PTHR11937:SF355SMART:SM00268
SUPFAM:SSF53067UniParc:UPI000842C6EFEnsemblPlantsGene:Zm00001d011087EnsemblPlants:Zm00001d011087_P001EnsemblPlants:Zm00001d011087_T001:
Description
Actin-7
Coordinates
chr8:+:138475456..138478174
Molecular Weight (calculated)
50236.6 Da
IEP (calculated)
6.299
GRAVY (calculated)
-0.146
Length
454 amino acids
Sequence
(BLAST)
001: MHIPPAFPFR PLHFILPGAL STSLALGRRR RLLCEVLCGA TRAESALPPQ EFARLAPPNL AVAWAPVQGW RRRSSVEMAD GEDIQPLVCD NGTGMVKAGF
101: AGDDAPRAVF PSIVGRPRHT GVMVGMGQKD AYVGDEAQSK RGILTLKYPI EHGIVSNWDD MEKIWHHTFY NELRVAPEEH PVLLTEAPLN PKANREKMTQ
201: IMFETFNVPA MYVAIQAVLS LYASGRTTGI VLDSGDGVSH TVPIYEGYAL PHAILRLDLA GRDLTDSLMK ILTERGYSFT TSAEREIVRD IKEKLAYIAL
301: DYEQELETAK NSSSVEKSYE LPDGQVITIG AERFRCPEVL FQPSMIGMEA AGIHETTYNS IMKCDVDIRK DLYGNIVLSG GSTMFPGIAD RMSKEITSLA
401: PSSMKIKVVA PPERKYSVWI GGSILASLST FQQMWISKEE YDESGPAIVH RKCF
Best Arabidopsis Sequence Match ( AT2G37620.2 )
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Arabidopsis Description
ACT1Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ47]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.