Factsheet for Bra028615.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000010.1-P
Bra005178.1-P
Bra006033.1-P
Bra009081.1-P
Bra017166.1-P
Bra018268.1-P
Bra022278.1-P
Bra028615.1-P
Bra034778.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G09810.1	Bra018268.1-P	AT2G31200.1	21798944
AT5G09810.1	Bra000010.1-P	AT2G37620.1	21798944
AT5G09810.1	Bra005178.1-P	AT2G37620.1	21798944
AT5G09810.1	Bra017166.1-P	AT2G37620.1	21798944
AT5G09810.1	Bra034778.1-P	AT3G12110.1	21798944
AT5G09810.1	Bra022278.1-P	AT3G18060.1	21798944
AT5G09810.1	Bra006033.1-P	AT5G09810.1	21798944
AT5G09810.1	Bra009081.1-P	AT5G09810.1	21798944
AT5G09810.1	Bra028615.1-P	AT5G09810.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85794	Canola	cytosol	93.37	99.72
CDY40061	Canola	cytosol	93.37	99.72
AT5G09810.1	Thale cress	cytosol	99.2	99.2
Bra009081.1-P	Field mustard	cytosol	92.57	98.87
Bra006033.1-P	Field mustard	cytosol	98.41	98.41
HORVU5Hr1G117900.1	Barley	cytosol	98.41	98.41
TraesCS5B01G516100.1	Wheat	cytosol	98.41	98.41
TraesCS5D01G516200.1	Wheat	cytosol	98.41	98.41
KRH53856	Soybean	endoplasmic reticulum, mitochondrion	86.47	98.19
KRH64098	Soybean	cytosol	98.14	98.14
Os11t0163100-01	Rice	nucleus, plasma membrane, plastid	98.14	98.14
PGSC0003DMT400047481	Potato	cytosol	98.14	98.14
Solyc03g078400.2.1	Tomato	nucleus, plastid	98.14	98.14
TraesCS4A01G356100.2	Wheat	cytosol	98.41	97.89
EES08028	Sorghum	cytosol	97.61	97.61
KRH43389	Soybean	cytosol	97.61	97.61
KRH59535	Soybean	cytosol	97.61	97.61
KXG23031	Sorghum	cytosol	97.61	97.61
PGSC0003DMT400010174	Potato	cytosol	97.61	97.61
Solyc11g005330.1.1	Tomato	nucleus	97.61	97.61
TraesCS5B01G124100.1	Wheat	cytosol	97.61	97.61
GSMUA_Achr6P25350_001	Banana	cytosol	97.35	97.35
Zm00001d053177_P004	Maize	cytosol	97.35	97.35
GSMUA_Achr9P03170_001	Banana	cytosol	97.08	97.34
GSMUA_Achr9P08850_001	Banana	cytosol	89.92	97.13
GSMUA_Achr5P29190_001	Banana	cytosol	89.66	97.13
Os03t0836000-01	Rice	plasma membrane, plastid	97.08	97.08
Os05t0106600-01	Rice	nucleus	97.08	97.08
GSMUA_Achr3P02960_001	Banana	cytosol	96.82	96.82
GSMUA_Achr8P16150_001	Banana	cytosol	96.82	96.82
KXG21029	Sorghum	cytosol	96.82	96.82
TraesCS1B01G024500.1	Wheat	golgi, nucleus	96.82	96.82
TraesCS1D01G020000.1	Wheat	cytosol	96.82	96.82
Zm00001d011086_P005	Maize	cytosol	96.82	96.82
Zm00001d035720_P002	Maize	cytosol	96.82	96.82
EER90564	Sorghum	cytosol	96.55	96.55
GSMUA_Achr2P16160_001	Banana	cytosol	96.55	96.55
GSMUA_Achr6P34320_001	Banana	cytosol	62.33	96.31
GSMUA_Achr10P...	Banana	cytosol	96.29	96.29
GSMUA_Achr7P10410_001	Banana	cytosol	96.02	96.02
GSMUA_Achr8P02660_001	Banana	cytosol	96.02	96.02
Os01t0964133-01	Rice	plasma membrane	96.02	96.02
GSMUA_Achr11P...	Banana	cytosol	88.86	95.99
Zm00001d019635_P001	Maize	cytosol	35.01	95.65
Bra034778.1-P	Field mustard	cytosol	95.49	95.49
Bra007025.1-P	Field mustard	cytosol	95.23	95.23
Bra000010.1-P	Field mustard	cytosol	94.96	94.96
Bra014865.1-P	Field mustard	cytosol	94.96	94.96
Zm00001d035722_P007	Maize	plasma membrane	96.82	94.81
Bra017166.1-P	Field mustard	cytosol	94.69	94.69
GSMUA_Achr11P...	Banana	cytosol	94.69	94.69
Bra018210.1-P	Field mustard	cytosol	94.43	94.43
Bra019486.1-P	Field mustard	cytosol	94.43	94.43
Bra033819.1-P	Field mustard	cytosol	94.43	94.43
Bra005178.1-P	Field mustard	cytosol	88.33	94.07
Zm00001d012277_P001	Maize	cytosol	93.63	93.88
Bra020319.1-P	Field mustard	cytosol	84.62	93.82
TraesCS5D01G132200.1	Wheat	golgi	92.31	93.8
Bra006719.1-P	Field mustard	cytosol	82.49	93.67
EES01810	Sorghum	cytosol	93.37	93.62
Os05t0438800-01	Rice	plasma membrane, plastid	93.37	93.62
HORVU1Hr1G074350.1	Barley	cytosol	93.1	93.35
TraesCS1A01G274400.1	Wheat	golgi	93.1	93.35
TraesCS1B01G283900.1	Wheat	cytosol	93.1	93.35
TraesCS1D01G274400.1	Wheat	cytosol	93.1	93.35
Zm00001d042731_P002	Maize	extracellular, plasma membrane, plastid	92.84	93.09
Zm00001d016605_P001	Maize	cytosol	38.99	93.04
Zm00001d034761_P002	Maize	cytosol	96.55	92.86
EES19603	Sorghum	cytosol	92.57	92.82
Zm00001d010159_P002	Maize	extracellular, plasma membrane	92.31	92.55
Bra022356.1-P	Field mustard	cytosol	78.51	91.64
TraesCS5A01G124300.2	Wheat	golgi	97.61	89.98
HORVU1Hr1G002840.6	Barley	plasma membrane	96.82	89.68
TraesCS1A01G020500.2	Wheat	cytosol	96.82	89.68
Bra003156.1-P	Field mustard	cytosol	48.81	89.32
Zm00001d016508_P001	Maize	cytosol	31.57	86.23
GSMUA_Achr10P...	Banana	cytosol	62.86	86.18
KXG21030	Sorghum	cytosol	87.53	84.83
Bra037560.1-P	Field mustard	cytoskeleton, cytosol	79.05	84.42
Zm00001d008746_P001	Maize	cytosol	61.54	84.36
GSMUA_Achr2P08030_001	Banana	cytosol	77.45	83.43
Zm00001d019396_P001	Maize	cytosol	36.6	82.14
VIT_04s0044g00580.t01	Wine grape	extracellular	98.41	80.65
Zm00001d011087_P001	Maize	plastid	96.82	80.4
Zm00001d007792_P001	Maize	cytosol	55.7	79.55
HORVU5Hr1G039850.3	Barley	mitochondrion	93.37	75.7
Zm00001d003298_P001	Maize	cytosol	52.79	75.67
Bra016895.1-P	Field mustard	cytosol	60.74	75.58
Zm00001d004087_P001	Maize	cytosol	41.11	71.76
Os01t0866100-01	Rice	plasma membrane	38.2	70.94
Zm00001d004855_P002	Maize	cytoskeleton, cytosol, nucleus	96.29	61.53
Bra002571.1-P	Field mustard	nucleus	94.16	58.68
Bra039097.1-P	Field mustard	cytosol	44.56	43.19
Bra025243.1-P	Field mustard	cytosol	41.91	43.17
Bra003429.1-P	Field mustard	cytosol	37.14	38.89
Zm00001d034421_P004	Maize	plastid	45.89	36.97
Bra016738.1-P	Field mustard	cytosol	38.2	33.72
Bra019815.1-P	Field mustard	cytosol	37.67	33.26
Bra007566.1-P	Field mustard	cytosol	28.12	32.32
Bra030818.1-P	Field mustard	cytosol	16.98	28.83
Bra019816.1-P	Field mustard	nucleus	11.41	11.41

Protein Annotations

MapMan:20.2.1	Gene3D:3.30.420.40	Gene3D:3.90.640.10	ProteinID:ABS70449	ProteinID:ABS70449.1	ProteinID:AEN25580
ProteinID:AEN25580.1	InterPro:Actin	InterPro:Actin/actin-like_CS	InterPro:Actin_CS	EnsemblPlantsGene:Bra028615	EnsemblPlants:Bra028615.1
EnsemblPlants:Bra028615.1-P	EMBL:EU012495	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
EMBL:JN120480	UniProt:M4EIK0	PFAM:PF00022	PRINTS:PR00190	ScanProsite:PS00406	ScanProsite:PS00432
ScanProsite:PS01132	PANTHER:PTHR11937	PANTHER:PTHR11937:SF252	SMART:SM00268	SUPFAM:SSF53067	UniParc:UPI000254354A

Description

AT5G09810 (E=2e-218) ACT2, ACT7 | ACT7 (ACTIN 7); structural constituent of cytoskeleton

Coordinates

chrA02:-:1302154..1303533

Molecular Weight (calculated)

41625.0 Da

IEP (calculated)

5.050

GRAVY (calculated)

-0.169

Length

377 amino acids

Sequence
(BLAST)

001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN VPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDS LMKILTERGY
201: MFTTTAEREI VRDIKEKLAY VALDYEQELE TAKSSSSVEK NYELPDGQVI TIGAERFRCP EVLFQPSLVG MEAPGIHETT YNSIMKCDVD ISKDLYGNIV
301: LSGGSTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS KGEYDESGPS IVHRKCF

Best Arabidopsis Sequence Match ( AT5G09810.1 )
(BLAST)

001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN VPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDS LMKILTERGY
201: MFTTTAEREI VRDIKEKLAY VALDYEQELE TAKSSSSVEK NYELPDGQVI TIGAERFRCP EVLFQPSLIG MEAPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGSTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS KSEYDESGPS IVHRKCF

Arabidopsis Description

ACT7AtACT7 [Source:UniProtKB/TrEMBL;Acc:A0A178UEW4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.