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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid, extracellular

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, plastid
Any Predictor:cytosol, mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
 extracellular: 20408568
plastid: 22065420
plasma membrane: 23353019
msms PMID: 23353019 doi
D Hopff, S Wienkoop, S Lüthje
University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.
msms PMID: 20408568 doi
W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li
Department of Plant Nutrition, China Agricultural University, Beijing, PR China.
msms PMID: 22065420 doi
W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d003298_P001
Zm00001d004087_P001
Zm00001d004855_P002
Zm00001d007792_P001
Zm00001d008517_P001
Zm00001d008746_P001
Zm00001d008768_P001
Zm00001d009747_P001
Zm00001d010159_P002
Zm00001d011086_P005
Zm00001d011087_P001
Zm00001d011131_P001
Zm00001d011132_P001
Zm00001d011202_P002
Zm00001d012277_P001
Zm00001d013141_P001
Zm00001d014053_P001
Zm00001d016508_P001
Zm00001d016605_P001
Zm00001d019396_P001
Zm00001d019635_P001
Zm00001d029295_P001
Zm00001d029656_P003
Zm00001d034024_P001
Zm00001d034326_P001
Zm00001d034421_P004
Zm00001d034761_P002
Zm00001d035720_P002
Zm00001d035722_P007
Zm00001d038078_P001
Zm00001d038846_P001
Zm00001d039163_P002
Zm00001d040038_P001
Zm00001d042097_P001
Zm00001d042731_P002
Zm00001d044301_P001
Zm00001d047714_P001
Zm00001d053177_P004

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G49240.1 Zm00001d009747_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d011131_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d011132_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d011202_P002 AT1G72770.1 19033529
AT1G49240.1 Zm00001d038846_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d039163_P002 AT1G72770.1 19033529
AT1G49240.1 Zm00001d044301_P001 AT1G72770.1 19033529
AT5G09810.1 Zm00001d013141_P001 AT2G31200.1 21798944
AT5G09810.1 Zm00001d029656_P003 AT2G31200.1 21798944
AT5G09810.1 Zm00001d034024_P001 AT2G31200.1 21798944
AT5G09810.1 Zm00001d034326_P001 AT2G31200.1 21798944
AT5G09810.1 Zm00001d008517_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d008768_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d014053_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d029295_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d038078_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d040038_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d042097_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d047714_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d003298_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d004087_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d004855_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d007792_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d008746_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d010159_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d011086_P005 AT5G09810.1 21798944
AT5G09810.1 Zm00001d011087_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d012277_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d016508_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d016605_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d019396_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d019635_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d034421_P004 AT5G09810.1 21798944
AT5G09810.1 Zm00001d034761_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d035720_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d035722_P007 AT5G09810.1 21798944
AT5G09810.1 Zm00001d042731_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d053177_P004 AT5G09810.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES01810 Sorghum cytosol 98.67 98.67
Zm00001d012277_P001 Maize cytosol 98.67 98.67
GSMUA_Achr9P03170_001 Banana cytosol 94.15 94.15
GSMUA_Achr5P29190_001 Banana cytosol 86.97 93.97
GSMUA_Achr10P... Banana cytosol 94.15 93.9
Zm00001d032480_P002 Maize plasma membrane, plastid 94.15 93.9
GSMUA_Achr8P16150_001 Banana cytosol 93.88 93.63
GSMUA_Achr8P02660_001 Banana cytosol 93.88 93.63
GSMUA_Achr2P16160_001 Banana cytosol 93.88 93.63
Zm00001d013873_P001 Maize plasma membrane, plastid 93.88 93.63
GSMUA_Achr6P34320_001 Banana cytosol 60.64 93.44
Zm00001d053177_P004 Maize cytosol 93.62 93.37
VIT_12s0178g00200.t01 Wine grape cytosol 93.62 93.37
AT5G09810.1 Thale cress cytosol 93.62 93.37
CDY21607 Canola cytosol 93.35 93.1
GSMUA_Achr7P10410_001 Banana cytosol 93.35 93.1
CDY56544 Canola cytosol 93.35 93.1
CDX81140 Canola cytosol 93.35 93.1
CDX69885 Canola cytosol 93.35 93.1
Zm00001d011086_P005 Maize cytosol 93.35 93.1
Zm00001d035720_P002 Maize cytosol 93.35 93.1
GSMUA_Achr3P02960_001 Banana cytosol 93.35 93.1
PGSC0003DMT400010174 Potato cytosol 93.09 92.84
KRH59535 Soybean cytosol 93.09 92.84
KRH43389 Soybean cytosol 93.09 92.84
PGSC0003DMT400047481 Potato cytosol 93.09 92.84
Bra006033.1-P Field mustard cytosol 93.09 92.84
GSMUA_Achr6P25350_001 Banana cytosol 93.09 92.84
Solyc03g078400.2.1 Tomato nucleus, plastid 93.09 92.84
Bra028615.1-P Field mustard cytosol 93.09 92.84
Solyc11g005330.1.1 Tomato nucleus 93.09 92.84
GSMUA_Achr9P08850_001 Banana cytosol 86.17 92.84
Zm00001d010159_P002 Maize extracellular, plasma membrane 92.82 92.82
Zm00001d019635_P001 Maize cytosol 34.04 92.75
CDY40061 Canola cytosol 86.97 92.63
CDY31972 Canola cytosol 86.97 92.63
CDY30296 Canola cytosol 86.97 92.63
CDX85794 Canola cytosol 86.97 92.63
Zm00001d013410_P001 Maize cytosol 92.82 92.57
KRH64098 Soybean cytosol 92.82 92.57
Zm00001d033790_P001 Maize cytosol 92.82 92.57
GSMUA_Achr11P... Banana cytosol 85.9 92.55
KRH53856 Soybean endoplasmic reticulum, mitochondrion 81.65 92.47
Bra009081.1-P Field mustard cytosol 86.7 92.35
GSMUA_Achr11P... Banana cytosol 92.55 92.31
Solyc01g104770.2.1 Tomato nucleus 92.29 92.04
PGSC0003DMT400076499 Potato cytosol 46.81 91.19
Zm00001d035722_P007 Maize plasma membrane 93.35 91.17
KRH43946 Soybean endoplasmic reticulum, mitochondrion, nucleus 90.43 90.19
KRH10484 Soybean endoplasmic reticulum, mitochondrion, nucleus 90.43 90.19
Zm00001d008746_P001 Maize cytosol 65.96 90.18
Solyc04g071260.2.1 Tomato plastid 89.63 89.39
Zm00001d034761_P002 Maize cytosol 93.09 89.29
AT3G18780.3 Thale cress cytosol 89.1 88.86
CDY18545 Canola cytosol 89.1 88.86
CDY61982 Canola cytosol 89.1 88.86
CDX95498 Canola cytosol 89.1 88.86
CDX92272 Canola cytosol 89.1 88.86
CDX99315 Canola cytosol 76.33 88.85
Zm00001d016605_P001 Maize cytosol 37.23 88.61
AT1G49240.1 Thale cress cytosol 88.83 88.59
CDX82326 Canola cytosol 88.83 88.59
Zm00001d016508_P001 Maize cytosol 32.45 88.41
Bra022356.1-P Field mustard cytosol 75.8 88.24
CDX92271 Canola cytosol 73.94 87.7
GSMUA_Achr10P... Banana cytosol 61.7 84.36
PGSC0003DMT400076501 Potato cytosol 44.68 84.0
Zm00001d019396_P001 Maize cytosol 37.23 83.33
Zm00001d007792_P001 Maize cytosol 57.71 82.2
Bra037560.1-P Field mustard cytoskeleton, cytosol 76.33 81.3
Zm00001d011087_P001 Maize plastid 93.35 77.31
PGSC0003DMT400087294 Potato mitochondrion 55.59 76.28
VIT_04s0044g00580.t01 Wine grape extracellular 93.09 76.09
Zm00001d003298_P001 Maize cytosol 51.33 73.38
Zm00001d004087_P001 Maize cytosol 40.16 69.91
PGSC0003DMT400022210 Potato cytosol 67.55 69.02
PGSC0003DMT400022205 Potato cytosol 64.36 66.12
PGSC0003DMT400074882 Potato cytosol 64.63 65.68
PGSC0003DMT400074887 Potato cytosol 61.44 62.43
PGSC0003DMT400088088 Potato cytosol 31.65 61.34
Zm00001d004855_P002 Maize cytoskeleton, cytosol, nucleus 93.09 59.32
Zm00001d022558_P001 Maize cytosol 45.48 43.96
Zm00001d034421_P004 Maize plastid 44.41 35.68
Zm00001d027326_P001 Maize cytosol, extracellular, nucleus 41.22 34.99
Zm00001d017106_P001 Maize cytosol 38.03 33.03
Zm00001d049629_P002 Maize nucleus 31.65 32.34
Zm00001d014112_P003 Maize cytosol 33.51 30.51
Zm00001d050981_P001 Maize cytosol 37.23 30.5
Zm00001d024059_P002 Maize cytosol 33.78 29.53
Zm00001d008652_P001 Maize endoplasmic reticulum, plastid 16.22 26.41
Protein Annotations
EntrezGene:100273396MapMan:20.2.1Gene3D:3.30.420.40Gene3D:3.90.640.10UniProt:A0A1D6N6H1InterPro:Actin
InterPro:Actin/actin-like_CSInterPro:Actin_CSGO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005524
ProteinID:ONM36194.1ProteinID:ONM36195.1PFAM:PF00022PRINTS:PR00190ScanProsite:PS00406ScanProsite:PS00432
ScanProsite:PS01132PANTHER:PTHR11937PANTHER:PTHR11937:SF205SMART:SM00268SUPFAM:SSF53067UniParc:UPI0002211F6F
EnsemblPlantsGene:Zm00001d042731EnsemblPlants:Zm00001d042731_P002EnsemblPlants:Zm00001d042731_T002:::
Description
Actin-7
Coordinates
chr3:-:178454661..178457447
Molecular Weight (calculated)
41665.0 Da
IEP (calculated)
4.969
GRAVY (calculated)
-0.194
Length
376 amino acids
Sequence
(BLAST)
001: MAEEDVQPLV CDNGTGMVKA GFAGDDAPRA VFPSIVGRPR HTGVMVGMGQ KDAYVGDEAQ SKRGILTLKY PIEHGIVGNW DDMEKIWHHT FYNELRVAPE
101: EHPILLTEAP LNPKANREKM TQIMFETFSC PAMYVSIQAV LSLYASGRTT GIVLDSGDGV SHTVPIYEGY TLPHAIIRLD LAGRDLTDNL MKILTERGYS
201: FTTTAEREIV RDIKEKLAYV ALDYEQELET ARTSSTVEKS YELPDGQVIT IGAERFRCPE VLFQPSFIGM ESPGIHEATY NSIMKCDVDI RKDLYGNVVL
301: SGGSTMFPGI GDRMSKEITA LAPSSMKVKV VAPPERKYSV WIGGSILASL STFQQMWISK EEYDESGPGI VHMKCF
Best Arabidopsis Sequence Match ( AT3G46520.1 )
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDH LMKILTERGY
201: SFTTTAEREI VRDMKEKLSY IALDYEQELE TSKTSSSVEK SFELPDGQVI TIGAERFRCP EVLFQPSMIG MENPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFGG IGDRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Arabidopsis Description
ACT12Actin-12 [Source:UniProtKB/Swiss-Prot;Acc:P53497]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.