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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • nucleus 1
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400076499 Potato cytosol 58.25 58.55
Zm00001d016605_P001 Maize cytosol 43.81 53.8
Zm00001d019635_P001 Maize cytosol 37.63 52.9
Zm00001d019396_P001 Maize cytosol 42.78 49.4
Zm00001d016508_P001 Maize cytosol 35.05 49.28
Zm00001d003298_P001 Maize cytosol 55.67 41.06
Os01t0866100-01 Rice plasma membrane 41.24 39.41
Zm00001d004087_P001 Maize cytosol 42.78 38.43
GSMUA_Achr5P29190_001 Banana cytosol 61.34 34.2
GSMUA_Achr10P... Banana cytosol 48.45 34.18
GSMUA_Achr9P08850_001 Banana cytosol 61.34 34.1
GSMUA_Achr11P... Banana cytosol 60.82 33.81
Zm00001d007792_P001 Maize cytosol 45.36 33.33
TraesCS5D01G132200.1 Wheat golgi 63.4 33.15
GSMUA_Achr9P03170_001 Banana cytosol 63.92 32.98
PGSC0003DMT400060225 Potato cytosol 63.92 32.89
PGSC0003DMT400071331 Potato cytosol 63.92 32.89
Os01t0964133-01 Rice plasma membrane 63.92 32.89
Zm00001d011086_P005 Maize cytosol 63.92 32.89
Os11t0163100-01 Rice nucleus, plasma membrane, plastid 63.92 32.89
Os05t0106600-01 Rice nucleus 63.92 32.89
TraesCS5B01G124100.1 Wheat cytosol 63.92 32.89
TraesCS1D01G020000.1 Wheat cytosol 63.92 32.89
TraesCS1B01G024500.1 Wheat golgi, nucleus 63.92 32.89
EER90564 Sorghum cytosol 63.92 32.89
EES08028 Sorghum cytosol 63.92 32.89
Zm00001d053177_P004 Maize cytosol 63.92 32.89
Zm00001d035720_P002 Maize cytosol 63.92 32.89
GSMUA_Achr6P25350_001 Banana cytosol 63.92 32.89
KXG21029 Sorghum cytosol 63.92 32.89
GSMUA_Achr3P02960_001 Banana cytosol 63.4 32.63
PGSC0003DMT400077954 Potato cytosol 63.4 32.63
GSMUA_Achr10P... Banana cytosol 63.4 32.63
TraesCS5B01G516100.1 Wheat cytosol 63.4 32.63
GSMUA_Achr11P... Banana cytosol 63.4 32.63
PGSC0003DMT400060953 Potato cytosol 63.4 32.63
GSMUA_Achr2P16160_001 Banana cytosol 63.4 32.63
TraesCS5D01G516200.1 Wheat cytosol 63.4 32.63
PGSC0003DMT400049429 Potato cytosol 63.4 32.63
PGSC0003DMT400047481 Potato cytosol 63.4 32.63
GSMUA_Achr7P10410_001 Banana cytosol 63.4 32.63
PGSC0003DMT400010174 Potato cytosol 63.4 32.63
Os03t0836000-01 Rice plasma membrane, plastid 63.4 32.63
HORVU5Hr1G117900.1 Barley cytosol 63.4 32.63
KXG23031 Sorghum cytosol 63.4 32.63
TraesCS4A01G356100.2 Wheat cytosol 63.4 32.45
Os05t0438800-01 Rice plasma membrane, plastid 62.89 32.45
PGSC0003DMT400023026 Potato cytosol 62.89 32.36
GSMUA_Achr8P02660_001 Banana cytosol 62.89 32.36
GSMUA_Achr8P16150_001 Banana cytosol 62.89 32.36
GSMUA_Achr2P08030_001 Banana cytosol 58.25 32.29
Zm00001d035722_P007 Maize plasma membrane 63.92 32.21
Zm00001d012277_P001 Maize cytosol 62.37 32.18
EES01810 Sorghum cytosol 62.37 32.18
TraesCS1A01G274400.1 Wheat golgi 61.34 31.65
TraesCS1B01G283900.1 Wheat cytosol 61.34 31.65
TraesCS1D01G274400.1 Wheat cytosol 61.34 31.65
Zm00001d042731_P002 Maize extracellular, plasma membrane, plastid 61.34 31.65
HORVU1Hr1G074350.1 Barley cytosol 61.34 31.65
Zm00001d010159_P002 Maize extracellular, plasma membrane 61.34 31.65
PGSC0003DMT400074882 Potato cytosol 60.31 31.62
PGSC0003DMT400001169 Potato cytosol 61.34 31.48
PGSC0003DMT400022205 Potato cytosol 59.28 31.42
EES19603 Sorghum cytosol 60.82 31.38
Zm00001d034761_P002 Maize cytosol 63.4 31.38
PGSC0003DMT400022210 Potato cytosol 59.28 31.25
KXG21030 Sorghum cytosol 62.37 31.11
TraesCS1A01G020500.2 Wheat cytosol 63.92 30.47
HORVU1Hr1G002840.6 Barley plasma membrane 63.92 30.47
TraesCS5A01G124300.2 Wheat golgi 63.92 30.32
PGSC0003DMT400087294 Potato mitochondrion 41.24 29.2
PGSC0003DMT400074887 Potato cytosol 54.64 28.65
Zm00001d011087_P001 Maize plastid 63.92 27.31
HORVU5Hr1G039850.3 Barley mitochondrion 58.76 24.52
Zm00001d004855_P002 Maize cytoskeleton, cytosol, nucleus 63.92 21.02
Zm00001d008746_P001 Maize cytosol 28.87 20.36
GSMUA_Achr6P34320_001 Banana cytosol 25.26 20.08
Zm00001d034421_P004 Maize plastid 43.3 17.95
PGSC0003DMT400052197 Potato cytosol 35.57 17.29
PGSC0003DMT400056033 Potato cytosol 38.14 17.01
PGSC0003DMT400019210 Potato cytosol 29.9 16.11
PGSC0003DMT400027956 Potato cytosol 35.57 16.01
PGSC0003DMT400038724 Potato cytosol 27.84 12.33
PGSC0003DMT400076501 Potato cytosol 4.12 4.0
Protein Annotations
EnsemblPlants:PGSC0003DMT400088088EnsemblPlantsGene:PGSC0003DMG400037659Gene3D:3.30.420.40Gene3D:3.90.640.10InterPro:ActinInterPro:Actin/actin-like_CS
PANTHER:PTHR11937PANTHER:PTHR11937:SF361PFAM:PF00022PGSC:PGSC0003DMG400037659PRINTS:PR00190ScanProsite:PS01132
SMART:SM00268SUPFAM:SSF53067UniParc:UPI000294DCFEUniProt:M1DF77MapMan:35.1:
Description
Actin [Source:PGSC_GENE;Acc:PGSC0003DMG400037659]
Coordinates
chr4:-:59699527..59708807
Molecular Weight (calculated)
21465.2 Da
IEP (calculated)
7.808
GRAVY (calculated)
-0.037
Length
194 amino acids
Sequence
(BLAST)
001: MDILQTLVFD NGTRMTKAGF AGDDSPRIVF PSLVGHRRNS GIMVGMGSRD PYVGYEAESK RFMLTLNHPI EQGIHPVLLT EAPFNTKINR ERMTEIMFEK
101: FNVPAMHVAT QAVLSLFANG RTIGIVLDSG ECVTHIVPIY EGHVLPHAIS RLDIGGRDLS KVPVVMNLAM KQFEGTFRKG NDVQVLAQLK EATT
Best Arabidopsis Sequence Match ( AT2G37620.2 )
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Arabidopsis Description
ACT1Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ47]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.