Factsheet for GSMUA_Achr8P01270_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr1P28080_001
GSMUA_Achr2P15470_001
GSMUA_Achr4P11860_001
GSMUA_Achr5P09600_001
GSMUA_Achr9P23800_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G13180.1	GSMUA_Achr10P...	AT1G29170.1	17267444
AT1G13180.1	GSMUA_Achr2P15470_001	AT1G29170.1	17267444
AT1G13180.1	GSMUA_AchrUn_...	AT1G29170.1	17267444
AT1G13180.1	GSMUA_Achr4P11860_001	AT2G22640.1	17267444
AT1G13180.1	GSMUA_Achr9P23800_001	AT2G22640.1	17267444
AT1G13180.1	GSMUA_AchrUn_...	AT3G27000.1	17267444
AT1G13180.1	GSMUA_Achr1P28080_001	AT3G49290.1	17267444
AT1G13180.1	GSMUA_Achr5P09600_001	AT3G49290.1	17267444

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59228	Soybean	nucleus	73.54	73.36
VIT_01s0137g00280.t01	Wine grape	cytosol	73.3	73.13
GSMUA_Achr6P21120_001	Banana	cytosol	73.07	73.07
Solyc05g013940.2.1	Tomato	cytosol	72.83	72.49
PGSC0003DMT400027956	Potato	cytosol	72.83	72.16
Solyc04g024530.2.1	Tomato	cytosol	72.13	71.79
GSMUA_Achr2P05970_001	Banana	cytosol	29.51	71.19
Bra016738.1-P	Field mustard	cytosol	70.49	70.49
AT1G13180.1	Thale cress	cytosol	70.49	70.49
CDY21087	Canola	cytosol	70.26	70.26
CDY34585	Canola	cytosol	70.02	70.02
CDX98005	Canola	cytosol	69.79	69.79
Bra019815.1-P	Field mustard	cytosol	69.79	69.79
GSMUA_Achr9P07630_001	Banana	cytosol	69.79	69.63
CDY19392	Canola	cytosol	69.32	69.32
KXG24330	Sorghum	cytosol	70.26	68.97
KRH59222	Soybean	cytosol	30.91	68.75
TraesCS7A01G311700.1	Wheat	cytosol	69.09	67.66
TraesCS7B01G211500.1	Wheat	cytosol	68.62	67.2
Zm00001d049629_P002	Maize	nucleus	56.91	66.03
HORVU7Hr1G074460.5	Barley	cytosol	66.74	65.37
TraesCS7D01G308200.1	Wheat	cytosol	68.62	64.97
Os08t0128300-01	Rice	cytosol	26.46	62.78
GSMUA_Achr2P05960_001	Banana	cytosol	44.73	62.42
GSMUA_Achr10P...	Banana	cytosol	27.87	43.27
GSMUA_Achr10P...	Banana	cytosol	31.15	40.43
GSMUA_Achr2P08030_001	Banana	cytosol	33.02	40.29
GSMUA_Achr6P02480_001	Banana	cytosol	27.4	39.39
GSMUA_Achr3P20240_001	Banana	cytosol	27.63	39.33
GSMUA_Achr2P15150_001	Banana	cytosol	32.08	39.26
GSMUA_Achr9P03170_001	Banana	cytosol	34.43	39.1
GSMUA_Achr10P...	Banana	cytosol	34.43	38.99
GSMUA_Achr3P02960_001	Banana	cytosol	34.43	38.99
GSMUA_AchrUn_...	Banana	plasma membrane	34.43	38.99
GSMUA_Achr4P31250_001	Banana	cytosol	34.43	38.99
GSMUA_Achr8P16150_001	Banana	cytosol	34.43	38.99
GSMUA_Achr5P29190_001	Banana	cytosol	31.62	38.79
GSMUA_Achr10P...	Banana	cytosol	23.89	38.78
GSMUA_Achr2P16160_001	Banana	cytosol	34.19	38.73
GSMUA_Achr6P25350_001	Banana	cytosol	34.19	38.73
GSMUA_Achr9P08850_001	Banana	cytosol	31.62	38.68
GSMUA_Achr11P...	Banana	cytosol	31.62	38.68
GSMUA_Achr7P10410_001	Banana	cytosol	33.96	38.46
GSMUA_Achr1P05990_001	Banana	plasma membrane	33.96	38.46
GSMUA_Achr7P18630_001	Banana	cytosol	28.81	38.44
GSMUA_Achr8P02660_001	Banana	cytosol	33.72	38.2
GSMUA_Achr11P...	Banana	cytosol	33.49	37.93
GSMUA_Achr1P20200_001	Banana	cytosol	29.74	36.6
GSMUA_Achr6P34320_001	Banana	cytosol	19.91	34.84
GSMUA_AchrUn_...	Banana	cytosol	31.15	34.19
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	17.8	26.12
GSMUA_Achr8P16860_001	Banana	endoplasmic reticulum	26.46	23.89
GSMUA_AchrUn_...	Banana	cytosol	22.72	22.3

Protein Annotations

MapMan:20.2.2.1.2	Gene3D:3.30.420.40	Gene3D:3.90.640.10	InterPro:Actin	InterPro:Arp3	GO:GO:0000166
GO:GO:0000902	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005856	GO:GO:0005885	GO:GO:0007015
GO:GO:0008150	GO:GO:0009653	GO:GO:0009825	GO:GO:0009987	GO:GO:0010090	GO:GO:0016043
GO:GO:0016049	GO:GO:0030154	GO:GO:0034314	GO:GO:0040007	EnsemblPlantsGene:GSMUA_Achr8G01270_001	EnsemblPlants:GSMUA_Achr8P01270_001
EnsemblPlants:GSMUA_Achr8T01270_001	UniProt:M0TLM9	PFAM:PF00022	PANTHER:PTHR11937	PANTHER:PTHR11937:SF258	SMART:SM00268
SUPFAM:SSF53067	UniParc:UPI0002960253	:	:	:	:

Description

Actin-related protein 3 [Source:GMGC_GENE;Acc:GSMUA_Achr8G01270_001]

Coordinates

chr8:-:1067733..1083929

Molecular Weight (calculated)

47644.8 Da

IEP (calculated)

4.707

GRAVY (calculated)

-0.160

Length

427 amino acids

Sequence
(BLAST)

001: MDAASRPAVV IDNGTGYTKI GFAGNVEPSF VIPSVVAVNE SFLNQSEGRN MGNYIAQYNS GIMADLDFFI GEEAVSKSRA SGIYNLSYPI QHSKVTNWDT
101: MEKFWQQCIY NYLSCDPEDH YFLLTESPIT SPEDREYMGE IMFETFNVPG MYIALQPVLA LSAGCSTPKP QMTGVVVDIG DGATHVVPVV DGYIIGSSIK
201: SFPISGSDIT QFVLQLLRER GELIPPEDSF EIAQKVKEMY CYNSSSIIKE YSKYDKKPEK YIKQWTGVKP MTGVPFSFDI GYERFLGPEV FFHPEICVDD
301: FRTPLPDVID MCVQSAPIDT RRGLYKNVVL SGGSTMFKGL QKRLQMDLKK IVDDRIAESN ARLGGDVISH PVEVNVVSHP VQKFAVWFGG SVVASLPEFH
401: ESCHTKEDYD EYGASICRTS PIFKGMY

Best Arabidopsis Sequence Match ( AT1G13180.1 )
(BLAST)

001: MDPTSRPAIV IDNGTGYTKM GFAGNVEPCF ILPTVVAVNE SFLNQSKSSS KATWQTQHNA GVAADLDFYI GDEALAKSRS SSTHNLHYPI EHGQVEDWDA
101: MERYWQQCIF NYLRCDPEDH YFLLTESPLT PPESREYTGE ILFETFNVPG LYIAVNSVLA LAAGYTTSKC EMTGVVVDVG DGATHVVPVA EGYVIGSCIK
201: SIPIAGKDVT LFIQQLMRER GENIPPEDSF DVARKVKEMY CYTCSDIVKE FNKHDKEPAK YIKQWKGVKP KTGAPYTCDV GYERFLGPEV FFNPEIYSND
301: FTTTLPAVID KCIQSAPIDT RRALYKNIVL SGGSTMFKDF GRRLQRDLKK IVDARVLANN ARTGGEITSQ PVEVNVVSHP VQRFAVWFGG SVLSSTPEFF
401: ASCRTKEEYE EYGASICRTN PVFKGMY

Arabidopsis Description

ARP3Actin-related protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAF1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.