Factsheet for HORVU4Hr1G008310.9

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0718100-01	Rice	plasma membrane	91.65	98.94
Zm00001d033790_P001	Maize	cytosol	91.4	98.67
Zm00001d013410_P001	Maize	cytosol	91.4	98.67
KXG37705	Sorghum	cytosol	91.4	98.67
HORVU5Hr1G117900.1	Barley	cytosol	88.7	95.76
HORVU1Hr1G047440.2	Barley	cytosol	87.96	94.96
TraesCS4D01G050800.2	Wheat	cytosol	87.72	91.54
HORVU1Hr1G074350.1	Barley	cytosol	84.52	91.49
HORVU5Hr1G000180.1	Barley	cytosol, nucleus	91.65	91.2
TraesCS4B01G050600.1	Wheat	cytosol	87.72	91.07
TraesCS4A01G264400.3	Wheat	cytosol, plastid	87.47	90.82
HORVU1Hr1G002840.6	Barley	plasma membrane	89.93	89.93
HORVU3Hr1G083380.1	Barley	cytosol	80.59	84.1
HORVU5Hr1G039850.3	Barley	mitochondrion	84.77	74.19
HORVU4Hr1G007240.3	Barley	cytosol	40.29	34.97
HORVU6Hr1G053910.4	Barley	cytosol	34.64	31.9
HORVU7Hr1G074460.5	Barley	cytosol	34.15	31.88
HORVU6Hr1G032610.8	Barley	cytosol	37.35	31.6
HORVU5Hr1G088030.1	Barley	plastid	37.84	30.32
HORVU5Hr1G102220.2	Barley	plastid	31.45	29.22
HORVU0Hr1G005770.1	Barley	cytosol	29.48	27.91

Protein Annotations

MapMan:20.2.1	Gene3D:3.30.420.40	Gene3D:3.90.640.10	UniProt:A0A287N409	InterPro:Actin	InterPro:Actin/actin-like_CS
InterPro:Actin_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:HORVU4Hr1G008310
EnsemblPlants:HORVU4Hr1G008310.9	PFAM:PF00022	PRINTS:PR00190	ScanProsite:PS00406	ScanProsite:PS00432	ScanProsite:PS01132
PANTHER:PTHR11937	PANTHER:PTHR11937:SF276	SMART:SM00268	SUPFAM:SSF53067	UniParc:UPI000B47A2F1	SEG:seg

Description

No Description!

Coordinates

chrchr4H:+:22666524..22668099

Molecular Weight (calculated)

45511.6 Da

IEP (calculated)

5.939

GRAVY (calculated)

-0.130

Length

407 amino acids

Sequence
(BLAST)

001: MADAEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDY LMKILTERGY
201: SFTTTAEREI VRDVKEKLSY IALDYDQEME TSKTSSSVEK SYELPDGQVI TIGSERFRCP EVLFQPSFIG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFTG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQVNKH YSIVLHSFHS WIFRFFAYSV AWLLLQMWIA KAEYDESGPS
401: IVHRKCF

Best Arabidopsis Sequence Match ( AT3G12110.1 )
(BLAST)

001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDY LMKILTERGY
201: SFTTSAEREI VRDVKEKLAY IALDYEQEME TANTSSSVEK SYELPDGQVI TIGGERFRCP EVLFQPSLVG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF

Arabidopsis Description

ACT11Actin-11 [Source:UniProtKB/Swiss-Prot;Acc:P53496]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.