CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033790_P001	Maize	cytosol	100.0	100.0
Zm00001d013410_P001	Maize	cytosol	100.0	100.0
Os03t0718100-01	Rice	plasma membrane	99.73	99.73
EES08028	Sorghum	cytosol	96.82	96.82
EER93954	Sorghum	cytosol	96.29	96.29
KXG21029	Sorghum	cytosol	96.29	96.29
KXG23031	Sorghum	cytosol	96.29	96.29
EER90564	Sorghum	cytosol	95.49	95.49
EES01810	Sorghum	cytosol	93.9	94.15
HORVU4Hr1G008310.9	Barley	cytosol	98.67	91.4
EES19603	Sorghum	cytosol	90.98	91.22
TraesCS4D01G050800.2	Wheat	cytosol	93.37	90.26
TraesCS4B01G050600.1	Wheat	cytosol	93.37	89.8
TraesCS4A01G264400.3	Wheat	cytosol, plastid	93.1	89.54
KXG21030	Sorghum	cytosol	87.27	84.58
EER99952	Sorghum	cytosol	45.62	44.22
EER91551	Sorghum	cytosol	34.22	35.83
EER93001	Sorghum	cytosol	41.64	35.44
KXG30555	Sorghum	cytosol	38.2	33.26
KXG24330	Sorghum	cytosol	37.67	32.64
OQU79631	Sorghum	cytosol	33.16	28.94

Protein Annotations

MapMan:20.2.1	Gene3D:3.30.420.40	Gene3D:3.90.640.10	UniProt:A0A1B6QIF9	InterPro:Actin	InterPro:Actin/actin-like_CS
InterPro:Actin_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856	EnsemblPlants:KXG37705	ProteinID:KXG37705
ProteinID:KXG37705.1	PFAM:PF00022	PRINTS:PR00190	ScanProsite:PS00406	ScanProsite:PS00432	ScanProsite:PS01132
PANTHER:PTHR11937	PANTHER:PTHR11937:SF364	SMART:SM00268	EnsemblPlantsGene:SORBI_3001G112600	SUPFAM:SSF53067	UniParc:UPI0000E64968

Description

hypothetical protein

Coordinates

chr1:-:8841059..8843471

Molecular Weight (calculated)

41799.2 Da

IEP (calculated)

5.159

GRAVY (calculated)

-0.178

Length

377 amino acids

Sequence
(BLAST)

001: MADAEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDY LMKILTERGY
201: SFTTTAEREI VRDMKEKLAY IALDYDQEME TAKTSSSVEK SYELPDGQVI TIGAERFRCP EVLFQPSFIG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF

Best Arabidopsis Sequence Match ( AT3G12110.1 )
(BLAST)

001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDY LMKILTERGY
201: SFTTSAEREI VRDVKEKLAY IALDYEQEME TANTSSSVEK SYELPDGQVI TIGGERFRCP EVLFQPSLVG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF

Arabidopsis Description

ACT11Actin-11 [Source:UniProtKB/Swiss-Prot;Acc:P53496]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.