Factsheet for TraesCS4D01G050800.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G264400.3	Wheat	cytosol, plastid	98.46	97.96
TraesCS4B01G050600.1	Wheat	cytosol	97.44	96.94
Os03t0718100-01	Rice	plasma membrane	90.51	93.63
TraesCS5D01G000400.1	Wheat	cytosol	90.51	93.63
Zm00001d033790_P001	Maize	cytosol	90.26	93.37
Zm00001d013410_P001	Maize	cytosol	90.26	93.37
KXG37705	Sorghum	cytosol	90.26	93.37
TraesCS5D01G132200.1	Wheat	golgi	88.21	92.72
TraesCS5D01G516200.1	Wheat	cytosol	87.95	90.98
TraesCS1D01G177400.1	Wheat	cytosol	87.69	90.72
TraesCS1D01G020000.1	Wheat	cytosol	87.44	90.45
HORVU4Hr1G008310.9	Barley	cytosol	91.54	87.72
TraesCS1D01G274400.1	Wheat	cytosol	83.85	86.97
TraesCS3D01G370400.3	Wheat	plastid	80.26	76.53
TraesCS3D01G362400.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	40.0	40.1
TraesCS5D01G364800.1	Wheat	cytosol	36.67	32.28
TraesCS6D01G149800.1	Wheat	cytosol	35.9	31.6
TraesCS6D01G194100.1	Wheat	cytosol	34.36	31.38
TraesCS5D01G429200.1	Wheat	cytosol	28.97	31.22
TraesCS7D01G308200.1	Wheat	cytosol	34.87	30.16
TraesCS2D01G600800.1	Wheat	cytosol	28.46	25.81

Protein Annotations

EnsemblPlants:TraesCS4D01G050800.2	EnsemblPlantsGene:TraesCS4D01G050800	Gene3D:3.30.420.40	Gene3D:3.90.640.10	InterPro:Actin	InterPro:Actin/actin-like_CS
InterPro:Actin_CS	PANTHER:PTHR11937	PANTHER:PTHR11937:SF276	PFAM:PF00022	PRINTS:PR00190	ScanProsite:PS00406
ScanProsite:PS01132	SEG:seg	SMART:SM00268	SUPFAM:SSF53067	TIGR:cd00012	MapMan:20.2.1

Description

No Description!

Coordinates

chr4D:+:26668292..26669816

Molecular Weight (calculated)

43122.9 Da

IEP (calculated)

5.435

GRAVY (calculated)

-0.079

Length

390 amino acids

Sequence
(BLAST)

001: MADAEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDY LMKILTERGY
201: SFTTTAEREI VRDVKEKLSY IALDYDQEME TSKTSSSVEK SYELPDGQVI TIGSERFRCP EVLFQPSFIG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFTG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQVNKR CSIVLHSFHS WIFVSLLTVL LVAADVDCKG

Best Arabidopsis Sequence Match ( AT3G18780.1 )
(BLAST)

001: MAEADDIQPI VCDNGTGMVK AGFAGDDAPR AVFPSVVGRP RHHGVMVGMN QKDAYVGDEA QSKRGILTLK YPIEHGVVSN WDDMEKIWHH TFYNELRIAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN SPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG FSLPHAILRL DLAGRDLTDY LMKILTERGY
201: MFTTTAEREI VRDIKEKLSF VAVDYEQEME TSKTSSSIEK NYELPDGQVI TIGAERFRCP EVLFQPSFVG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFSG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQVKID QILFRILLHA N

Arabidopsis Description

ACT2Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q96292]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.