Factsheet for Os03t0718100-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 5
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

extracellular: 18372294
plasma membrane: 19502382
nucleus: 19621931
plasma membrane: 27800704
plastid: 27992503
plasma membrane: 28056797

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 19502382 doi

M Fujiwara, S Hamada, M Hiratsuka, Y Fukao, T Kawasaki, K Shimamoto

Laboratory of Plant Protein Analysis, Plant Education Unit, Nara Institute of Science and Technology, Takayama, Ikoma, Japan.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 18372294 doi

T Aki, M Shigyo, R Nakano, T Yoneyama, S Yanagisawa

Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657 Japan.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37705	Sorghum	cytosol	99.73	99.73
Zm00001d033790_P001	Maize	cytosol	99.73	99.73
Zm00001d013410_P001	Maize	cytosol	99.73	99.73
Os05t0106600-01	Rice	nucleus	96.29	96.29
Os11t0163100-01	Rice	nucleus, plasma membrane, plastid	96.02	96.02
Os03t0836000-01	Rice	plasma membrane, plastid	96.02	96.02
Os01t0964133-01	Rice	plasma membrane	95.23	95.23
Os10t0510000-01	Rice	plastid	94.96	94.96
Os12t0163700-01	Rice	plastid	90.72	94.21
HORVU4Hr1G008310.9	Barley	cytosol	98.94	91.65
Os05t0438800-01	Rice	plasma membrane, plastid	90.98	91.22
TraesCS4D01G050800.2	Wheat	cytosol	93.63	90.51
TraesCS4B01G050600.1	Wheat	cytosol	93.63	90.05
TraesCS4A01G264400.3	Wheat	cytosol, plastid	93.37	89.8
Os01t0866100-01	Rice	plasma membrane	38.2	70.94
Os03t0783000-01	Rice	cytosol, nucleus	34.22	35.83
Os08t0137200-01	Rice	nucleus	40.85	34.76
Os08t0128300-01	Rice	cytosol	16.45	34.44
Os02t0596900-01	Rice	cytosol	38.46	33.88
Os01t0269900-01	Rice	cytosol	32.63	28.67

Protein Annotations

MapMan:20.2.1	Gene3D:3.30.420.40	Gene3D:3.90.640.10	EntrezGene:4333919	EMBL:AB047313	ProteinID:ABF98567.1
EMBL:AC091532	InterPro:Actin	InterPro:Actin/actin-like_CS	InterPro:Actin_CS	ProteinID:BAF13000.1	ProteinID:BAS86094.1
ProteinID:EAZ28382.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856	EMBL:KC140126	EnsemblPlantsGene:Os03g0718100
EnsemblPlants:Os03t0718100-01	PFAM:PF00022	PRINTS:PR00190	ScanProsite:PS00406	ScanProsite:PS00432	ScanProsite:PS01132
PANTHER:PTHR11937	PANTHER:PTHR11937:SF364	UniProt:Q10DV7	SMART:SM00268	SUPFAM:SSF53067	UniParc:UPI0000002731
UniProt:V5K461	RefSeq:XP_015630316.1	:	:	:	:

Description

ACTIN 1Actin 1. (Os03t0718100-01)

Coordinates

chr3:+:29074003..29075858

Molecular Weight (calculated)

41815.2 Da

IEP (calculated)

5.159

GRAVY (calculated)

-0.185

Length

377 amino acids

Sequence
(BLAST)

001: MADAEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDY LMKILTERGY
201: SFTTTAEREI VRDMKEKLSY IALDYDQEME TAKTSSSVEK SYELPDGQVI TIGAERFRCP EVLFQPSFIG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF

Best Arabidopsis Sequence Match ( AT3G12110.1 )
(BLAST)

001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDY LMKILTERGY
201: SFTTSAEREI VRDVKEKLAY IALDYEQEME TANTSSSVEK SYELPDGQVI TIGGERFRCP EVLFQPSLVG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF

Arabidopsis Description

ACT11Actin-11 [Source:UniProtKB/Swiss-Prot;Acc:P53496]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.