Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P20240_001 | Banana | cytosol | 80.11 | 49.67 |
| TraesCS5A01G000400.1 | Wheat | golgi | 100.0 | 49.34 |
| TraesCS5D01G000400.1 | Wheat | cytosol | 100.0 | 49.34 |
| GSMUA_Achr6P02480_001 | Banana | cytosol | 77.96 | 48.82 |
| GSMUA_Achr4P31250_001 | Banana | cytosol | 97.31 | 48.01 |
| GSMUA_Achr10P... | Banana | cytosol | 81.72 | 46.2 |
| HORVU5Hr1G000180.1 | Barley | cytosol, nucleus | 100.0 | 45.48 |
| GSMUA_Achr2P15150_001 | Banana | cytosol | 81.18 | 43.27 |
Protein Annotations
| EnsemblPlants:TraesCSU01G270700.1 | EnsemblPlantsGene:TraesCSU01G270700 | Gene3D:3.30.420.40 | Gene3D:3.90.640.10 | InterPro:Actin | InterPro:Actin_CS |
| PANTHER:PTHR11937 | PANTHER:PTHR11937:SF276 | PFAM:PF00022 | ScanProsite:PS00432 | SEG:seg | SMART:SM00268 |
| SUPFAM:SSF53067 | MapMan:20.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chrUn:-:454676619..454677179
Molecular Weight (calculated)
20868.1 Da
IEP (calculated)
5.365
GRAVY (calculated)
-0.218
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MKILTERGYS FTTTAEREIV RDMKEKLSYI ALDYDQEMET SKTSSSVEKS YELPDGQVIT IGAERFRCPE VLFQPSFIGM EAAGIHETTY NSIMKCDVDI
101: RKDLYGNIVL SGGTTMFTGI ADRMSKEITA LAPSSMKIKV VAPPERKYSV WIGGSILASL STFQQMWIAK AEYDESGPSI VHRKCF
101: RKDLYGNIVL SGGTTMFTGI ADRMSKEITA LAPSSMKIKV VAPPERKYSV WIGGSILASL STFQQMWIAK AEYDESGPSI VHRKCF
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDY LMKILTERGY
201: SFTTSAEREI VRDVKEKLAY IALDYEQEME TANTSSSVEK SYELPDGQVI TIGGERFRCP EVLFQPSLVG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDY LMKILTERGY
201: SFTTSAEREI VRDVKEKLAY IALDYEQEME TANTSSSVEK SYELPDGQVI TIGGERFRCP EVLFQPSLVG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Arabidopsis Description
ACT11Actin-11 [Source:UniProtKB/Swiss-Prot;Acc:P53496]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.