Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83847 | Canola | cytosol | 95.24 | 95.67 |
| CDX96721 | Canola | cytosol | 94.56 | 95.21 |
| CDY26159 | Canola | cytosol | 94.56 | 94.34 |
| CDY19213 | Canola | cytosol | 94.56 | 94.34 |
| PGSC0003DMT400056033 | Potato | cytosol | 77.55 | 78.62 |
| Solyc12g037980.1.1 | Tomato | nucleus | 77.1 | 78.16 |
| KRH66446 | Soybean | nucleus | 78.68 | 77.98 |
| KRH48882 | Soybean | nucleus | 78.0 | 77.13 |
| KRH41617 | Soybean | nucleus | 73.24 | 74.94 |
| Os08t0137200-01 | Rice | nucleus | 70.07 | 69.75 |
| EER93001 | Sorghum | cytosol | 69.61 | 69.3 |
| GSMUA_Achr8P16860_001 | Banana | endoplasmic reticulum | 73.7 | 68.71 |
| Zm00001d027326_P001 | Maize | cytosol, extracellular, nucleus | 68.71 | 68.4 |
| TraesCS5D01G364800.1 | Wheat | cytosol | 68.48 | 68.17 |
| TraesCS5B01G358500.1 | Wheat | cytosol | 68.48 | 68.17 |
| TraesCS5A01G356000.1 | Wheat | cytosol, nucleus | 68.25 | 67.95 |
| TraesCS6B01G189000.1 | Wheat | cytosol | 68.03 | 67.72 |
| TraesCS6D01G149800.1 | Wheat | cytosol | 67.57 | 67.27 |
| TraesCS6A01G162300.2 | Wheat | cytosol | 67.12 | 66.82 |
| HORVU6Hr1G032610.8 | Barley | cytosol | 68.25 | 62.58 |
| VIT_17s0000g04010.t01 | Wine grape | mitochondrion | 59.86 | 59.73 |
| HORVU5Hr1G088030.1 | Barley | plastid | 67.8 | 58.86 |
| AT5G09810.1 | Thale cress | cytosol | 37.64 | 44.03 |
| AT3G18780.3 | Thale cress | cytosol | 37.19 | 43.5 |
| AT3G12110.1 | Thale cress | cytosol | 37.19 | 43.5 |
| AT1G49240.1 | Thale cress | cytosol | 37.19 | 43.5 |
| AT3G46520.2 | Thale cress | cytosol | 36.73 | 42.97 |
| AT2G37620.1 | Thale cress | cytosol | 36.73 | 42.97 |
| AT3G53750.2 | Thale cress | cytosol | 36.73 | 42.97 |
| AT5G59370.2 | Thale cress | cytosol | 36.73 | 42.97 |
| AT2G42090.1 | Thale cress | cytosol | 34.47 | 41.53 |
| AT2G42100.1 | Thale cress | cytosol | 35.37 | 41.27 |
| AT2G42170.3 | Thale cress | cytosol | 29.02 | 38.91 |
| AT3G27000.1 | Thale cress | cytosol | 27.44 | 31.11 |
| AT1G13180.1 | Thale cress | cytosol | 27.89 | 28.81 |
| AT3G60830.1 | Thale cress | cytosol | 23.58 | 28.65 |
| AT3G33520.1 | Thale cress | cytosol | 25.85 | 27.08 |
Protein Annotations
| MapMan:12.4.6.1 | Gene3D:3.30.420.40 | Gene3D:3.90.640.10 | EntrezGene:838425 | ProteinID:AAF25998.1 | ProteinID:AEE29715.1 |
| EMBL:AF507912 | EMBL:AK228098 | ArrayExpress:AT1G18450 | EnsemblPlantsGene:AT1G18450 | RefSeq:AT1G18450 | TAIR:AT1G18450 |
| RefSeq:AT1G18450-TAIR-G | EnsemblPlants:AT1G18450.1 | TAIR:AT1G18450.1 | Symbol:ATARP4 | EMBL:AY087788 | InterPro:Actin |
| Unigene:At.16658 | EMBL:BT006474 | ProteinID:DAA00027.1 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005198 |
| GO:GO:0005200 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005730 | GO:GO:0005737 | GO:GO:0006325 | GO:GO:0007010 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009628 | GO:GO:0009791 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016569 | GO:GO:0030154 | GO:GO:0048235 | GO:GO:0048574 | RefSeq:NP_564051.1 | PFAM:PF00022 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0009062 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR11937 | PANTHER:PTHR11937:SF274 | UniProt:Q84M92 |
| SMART:SM00268 | SUPFAM:SSF53067 | UniParc:UPI0000162DED | SEG:seg | : | : |
Description
ARP4Actin-related protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q84M92]
Coordinates
chr1:+:6348048..6352010
Molecular Weight (calculated)
48939.3 Da
IEP (calculated)
4.991
GRAVY (calculated)
-0.357
Length
441 amino acids
Sequence
(BLAST)
(BLAST)
001: MYGGDEVSAI VVDLGSHTCK AGYAGEDAPK AVFPSVIGAV DGVEAMDVDV DSTKTNSNSE DSKTESEKEK SKRKLYVGSQ AMSYRRDHME VLSPIKDGIV
101: SDWDLVDNIW EHAFKSCLMI DPTEHPMLLA EPPLNTQQQR EKAAELMFEK YKVPALFMAK NPVLTSFATG RATSLVVDCG GGSTTISPVH DGYVLQKAVV
201: SSPLGGEFLT DCLLKSLESK GIKIRPRYSF KRKEVRAGEF QVEDVDIPDT TESYKLFCQR MIVGDIKDSI CRVPDTPYDD KSYSNIPTTS YELPDGQTLE
301: IGADRFKVPD VMFNPSIVQT IPGMEKYAEM IPSVRGLPHM VMESINKCDV DIRRELYSSI LLAGGTSSMQ QLKERLEKDL IEESPHSARV KVLASGNTTE
401: RRFSVWIGGS ILASLGSFQQ MWFSKSEYEE HGASYIQRKC P
101: SDWDLVDNIW EHAFKSCLMI DPTEHPMLLA EPPLNTQQQR EKAAELMFEK YKVPALFMAK NPVLTSFATG RATSLVVDCG GGSTTISPVH DGYVLQKAVV
201: SSPLGGEFLT DCLLKSLESK GIKIRPRYSF KRKEVRAGEF QVEDVDIPDT TESYKLFCQR MIVGDIKDSI CRVPDTPYDD KSYSNIPTTS YELPDGQTLE
301: IGADRFKVPD VMFNPSIVQT IPGMEKYAEM IPSVRGLPHM VMESINKCDV DIRRELYSSI LLAGGTSSMQ QLKERLEKDL IEESPHSARV KVLASGNTTE
401: RRFSVWIGGS ILASLGSFQQ MWFSKSEYEE HGASYIQRKC P
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.