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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX98086 Canola plastid 95.94 95.94
CDY30046 Canola plastid 95.94 95.94
Bra019733.1-P Field mustard plastid 95.76 95.76
CDY34604 Canola cytosol 84.63 94.48
GSMUA_Achr8P22590_001 Banana cytosol, plastid 80.74 81.03
VIT_10s0116g00360.t01 Wine grape cytosol, plastid 79.68 79.82
Solyc02g081160.2.1 Tomato plastid 78.8 78.38
GSMUA_Achr7P02210_001 Banana plastid 78.09 78.37
PGSC0003DMT400043111 Potato plastid 78.62 78.21
Zm00001d037278_P001 Maize plastid 76.5 76.77
AT4G04040.1 Thale cress cytosol 77.03 76.63
TraesCS7D01G200800.1 Wheat plastid 75.62 76.43
TraesCS7A01G198200.2 Wheat golgi, plastid 75.62 76.43
TraesCS7B01G104400.1 Wheat plastid 75.44 76.25
Os06t0247500-01 Rice plastid 75.8 75.66
Zm00001d044754_P001 Maize extracellular, plastid 76.5 74.66
GSMUA_Achr3P08040_001 Banana cytosol, mitochondrion 78.98 73.4
HORVU7Hr1G040550.9 Barley cytosol, peroxisome, plastid 74.73 63.51
KRH71808 Soybean cytosol 16.78 51.91
AT1G20950.1 Thale cress cytosol 37.1 34.2
AT1G76550.1 Thale cress cytosol 36.75 33.71
OQU89184 Sorghum cytosol 4.42 20.16
Protein Annotations
KEGG:00010+2.7.1.11KEGG:00030+2.7.1.11KEGG:00051+2.7.1.11KEGG:00052+2.7.1.11KEGG:00680+2.7.1.11Gene3D:1.10.10.480
MapMan:2.1.1.1.2Gene3D:3.40.50.450Gene3D:3.40.50.460EntrezGene:837752UniProt:A0A178W7Y1ProteinID:AAC17614.1
ProteinID:AEE28825.1ArrayExpress:AT1G12000EnsemblPlantsGene:AT1G12000RefSeq:AT1G12000TAIR:AT1G12000RefSeq:AT1G12000-TAIR-G
EnsemblPlants:AT1G12000.1TAIR:AT1G12000.1InterPro:ATP_PFKEMBL:AY062473EMBL:AY093260Unigene:At.21087
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0003872GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005618GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005829
GO:GO:0005975GO:GO:0006002GO:GO:0006091GO:GO:0006096GO:GO:0006139GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0009058GO:GO:0009719GO:GO:0009735GO:GO:0009987
GO:GO:0015979GO:GO:0016020GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0030312
GO:GO:0046686GO:GO:0046835GO:GO:0046872GO:GO:0047334GO:GO:0061615HAMAP:MF_01980
RefSeq:NP_172664.1ProteinID:OAP13861.1PFAM:PF00365PIRSF:PIRSF005677InterPro:PKF_sfPO:PO:0000005
PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078
PO:PO:0001081PO:PO:0001170PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095
PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616
PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025
PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047
PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022
PO:PO:0025281PRINTS:PR00476PANTHER:PTHR43650PANTHER:PTHR43650:SF6InterPro:PfpB_PPi_PFKInterPro:Phosphofructokinase_dom
UniProt:Q8W4M5SUPFAM:SSF53784TIGRFAMs:TIGR02477UniParc:UPI000004823ASEG:seg:
Description
PFP-BETA1Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4M5]
Coordinates
chr1:-:4049896..4053871
Molecular Weight (calculated)
61463.0 Da
IEP (calculated)
5.954
GRAVY (calculated)
-0.180
Length
566 amino acids
Sequence
(BLAST)
001: MAPALAVTRD LTAVGSPENA PAKGRASVYS EVQSSRINNT LPLPSVLKGA FKIVEGPASS AAGNPDEIAK LFPGLYGQPS VAVVPDQDAP SSAPKLKIGV
101: VLSGGQAPGG HNVISGLFDY LQERAKGSTF YGFKGGPAGI MKCKYVELNA EYIQPYRNQG GFDMICSGRD KIETPDQFKQ AEETAKKLDL DGLVVIGGDD
201: SNTNACLLAE NFRSKNLKTR VIGCPKTIDG DLKCKEVPTS FGFDTACKIY SEMIGNVMID ARSTGKYYHF VRLMGRAASH ITLECALQTH PNITIIGEEV
301: SAQKQTLKNV TDYMVDVICK RAELGYNYGV ILIPEGLIDF IPEVQELIAE LNEILANEVV DENGLWKKKL TEQSLKLFDL LPEAIQEQLM LERDPHGNVQ
401: VAKIETEKML IQMVETELEK RKQAGAYKGQ FMGQSHFFGY EGRCGLPTNF DATYCYALGY GAGVLLNSGK TGLISSVGNL AAPVEEWTVG GTALTALMDV
501: ERRHGKFKPV IKKAMVELEG APFKKFASLR EEWALKNRYI SPGPIQFTGP GSDSLSHTLL LELGAQ
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.