Factsheet for Os06t0326400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os03t0319300-01
Os03t0743500-02
Os05t0491000-01
Os05t0491100-01
Os07t0687200-02
Os12t0264500-02
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G20950.1	Os01t0267900-01	AT2G41100.1	17360592
AT1G20950.1	Os01t0279300-01	AT2G41100.1	17360592
AT1G20950.1	Os01t0810300-01	AT2G41100.1	17360592
AT1G20950.1	Os03t0319300-01	AT2G41100.1	17360592
AT1G20950.1	Os05t0491000-01	AT2G41100.1	17360592
AT1G20950.1	Os05t0491100-01	AT2G41100.1	17360592
AT1G20950.1	Os07t0687200-02	AT2G41100.1	17360592
AT1G20950.1	Os12t0603800-00	AT2G41100.1	17360592
AT1G20950.1	Os03t0743500-02	AT4G14640.1	17360592
AT1G20950.1	Os12t0264500-02	AT5G65940.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU76351	Sorghum	cytosol	92.6	92.75
Os02t0714200-01	Rice	cytosol, plasma membrane	89.07	89.79
TraesCS7B01G193600.1	Wheat	cytosol	88.1	89.69
TraesCS7A01G226000.2	Wheat	cytosol	88.1	89.69
TraesCS7D01G228500.1	Wheat	cytosol	87.46	89.03
Zm00001d045919_P001	Maize	mitochondrion	66.4	86.76
GSMUA_Achr7P20550_001	Banana	cytosol	83.44	84.67
HORVU7Hr1G047000.11	Barley	cytosol	87.62	81.71
VIT_18s0122g00510.t01	Wine grape	cytosol	80.87	81.66
GSMUA_Achr9P12330_001	Banana	cytosol	80.06	80.84
Solyc12g095760.1.1	Tomato	cytosol, extracellular, nucleus, unclear	79.9	80.55
PGSC0003DMT400075360	Potato	cytosol	79.9	80.55
Solyc04g082880.2.1	Tomato	cytosol, nucleus, plastid, unclear	79.42	80.19
PGSC0003DMT400025919	Potato	cytosol	79.26	80.03
KRH49514	Soybean	cytosol, endoplasmic reticulum, nucleus	78.94	79.58
AT1G76550.1	Thale cress	cytosol	78.94	79.58
CDX88295	Canola	cytosol	78.62	79.25
CDX87587	Canola	cytosol	78.46	79.09
KRG89187	Soybean	endoplasmic reticulum	78.3	78.93
Bra015734.1-P	Field mustard	cytosol	78.14	78.77
AT1G20950.1	Thale cress	cytosol	77.33	78.34
CDY67203	Canola	cytosol	77.49	77.87
Bra025858.1-P	Field mustard	cytosol	77.49	77.87
CDY67022	Canola	cytosol	77.33	77.71
CDY33660	Canola	cytosol	74.6	77.59
CDX96611	Canola	cytosol	74.44	77.42
Os08t0345700-01	Rice	extracellular	66.4	66.94
Os09t0298100-00	Rice	plastid	65.11	65.32
Os06t0247500-01	Rice	plastid	34.57	37.92

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	Gene3D:1.10.10.480
MapMan:2.1.1.1.2	Gene3D:3.40.50.450	Gene3D:3.40.50.460	EntrezGene:4340909	EMBL:AK065052	InterPro:ATP_PFK
ProteinID:BAF19442.1	ProteinID:BAS97531.1	ncoils:Coil	ProteinID:EEE65619.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003872	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006002	GO:GO:0006091	GO:GO:0006096
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0046835	GO:GO:0046872	GO:GO:0047334
GO:GO:0061615	HAMAP:MF_01980	EnsemblPlantsGene:Os06g0326400	EnsemblPlants:Os06t0326400-01	PFAM:PF00365	PIRSF:PIRSF005677
InterPro:PKF_sf	PRINTS:PR00476	PANTHER:PTHR43650	PANTHER:PTHR43650:SF3	InterPro:PfpB_PPi_PFK	InterPro:Phosphofructokinase_dom
UniProt:Q0DCI1	SUPFAM:SSF53784	TIGRFAMs:TIGR02477	UniParc:UPI0000E127AD	RefSeq:XP_015643847.1	SEG:seg

Description

pyrophosphate-fructose-6-phosphatephosphotransferase alpha subunit 2, PFP-alpha subunit 2Phosphofructokinase domain containing protein. (Os06t0326400-01)

Coordinates

chr6:+:12794383..12800188

Molecular Weight (calculated)

67562.4 Da

IEP (calculated)

7.268

GRAVY (calculated)

-0.072

Length

622 amino acids

Sequence
(BLAST)

001: MGSVAMDSDY GVPRELSALQ KARALYRPDL PPCLQGTTVK VEYGDAAIAA DVAGAHVISH AFPHTYGQPL AHFLRKTAAV PDATVITEHP VVRVGVVFSG
101: RQSPGGHNVI WGLHDAIKAH NANSKLIGFL GGTDGLFAQK TLEISDEVLS SYKNQGGYDL LGRTRDQIRT TEQVNAAMTA CQALKLDALV IIGGVTSNTD
201: AAQLAETFAE SKCSTKVVGV PVTLNGDLKN QFVETTVGFD TICKVNSQLI SNVCTDALSA EKYYYFVRLM GRKASHVALE CALQSHPNMV ILGEEVAASK
301: LTIFDITKQI CDAVQARAEK DKNHGVVLIP EGLVESIPEL YALLQEIHGL HDKGVSVENI SSHLSPWASA LFEFLPPFIR KQLLLHPESD DSAQLSQIET
401: EKLLAQLVEA EMNKRLKEGT YKGKKFNAIC HFFGYQARGA LPSKFDCDYA YVLGHVCYHI LAAGLNGYMA TVTNLRSPVN KWKCGAAPIT SMMTVKRWSR
501: GPAASQIGKP AVHMASIDLK GKPYELLRQN SSSFLMEDIY RNPGPLQFEG PGGETKPISL CVEDRDYMGR IKQLQEYLEK VKSIVKPGCS QDVLKAALSA
601: MASVTEMLTI MSSPSFSGQA TI

Best Arabidopsis Sequence Match ( AT1G76550.1 )
(BLAST)

001: MDSDFGIPRE LSPLQQLRSQ YHPELPPCLQ GTTVRVELGD GTTVAKAGDA HIIARAFPHT LGQPLAHFLR ATAKVADAQI ITEHPVKRVG IVFCGRQAPG
101: GHNVVWGLYE ALKVHNAKNT LLGFLGGSEG LFAQKTLEIT DEVLQTYKNQ GGYDMLGRTK DQIRTTEQVN AALKACTDLK LDSLVIIGGV TSNTDAAHLA
201: EFFAEAKCST KVVGVPVTIN GDLKNQFVEA NVGFDTTCKV NSQLISNICT DALSAEKYYY FVRLMGRKHS HVALECTLQS HPNMVILGEE VTASKLTIFD
301: IIKQICDAVQ ARAEQDKNHG VILIPEGLVE SIPELYALLK EIHGLLKEGV QVDNISTQLS SWSSALFEFL PPFIKKQLLL HPESDDSAQL SQIETEKLLA
401: YLVETEMNKR LKEGTYKGKK FNAICHFFGY QARGSLPSKF DCDYAYVLGH VCYHILAAGL NGYMATVTNL KSPVNKWKCG AAPISAMMTV KRWSQNSGST
501: TIGRPVIHPA SVDLKGKAYD LLRQNAQKFL MEDMYRNPGP VQYDGPGADA KAVSLCVEDQ DYMGKIKKLQ EYLDQVRTIV KPGCSQDVLK AALSVMASVT
601: DVLTTISSSS TSGQQFA

Arabidopsis Description

PFP-ALPHA2Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.