CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER91893
EES01631
EES09201
EES16322
KXG29172
KXG37587
KXG37588
OQU78227
OQU84058

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G20950.1	EES01631	AT2G41100.1	17360592
AT1G20950.1	EES09201	AT2G41100.1	17360592
AT1G20950.1	EES16322	AT2G41100.1	17360592
AT1G20950.1	OQU78227	AT2G41100.1	17360592
AT1G20950.1	KXG37587	AT4G14640.1	17360592
AT1G20950.1	KXG37588	AT4G14640.1	17360592
AT1G20950.1	EER91893	AT5G65940.1	21798944
AT1G20950.1	KXG29172	AT5G65940.1	21798944
AT1G20950.1	OQU84058	AT5G65940.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017830_P001	Maize	cytosol	97.73	97.41
Os02t0714200-01	Rice	cytosol, plasma membrane	93.99	93.84
TraesCS6D01G259500.1	Wheat	golgi	93.51	93.51
TraesCS6B01G307200.1	Wheat	cytosol	93.51	93.51
TraesCS6A01G279100.2	Wheat	cytosol	87.99	93.29
Zm00001d051629_P003	Maize	cytosol	92.53	91.35
HORVU6Hr1G070270.5	Barley	cytosol	93.83	88.65
OQU76351	Sorghum	cytosol	87.66	86.96
GSMUA_Achr7P20550_001	Banana	cytosol	83.12	83.52
Solyc12g095760.1.1	Tomato	cytosol, extracellular, nucleus, unclear	82.95	82.82
PGSC0003DMT400075360	Potato	cytosol	82.95	82.82
GSMUA_Achr9P12330_001	Banana	cytosol	81.82	81.82
Solyc04g082880.2.1	Tomato	cytosol, nucleus, plastid, unclear	81.17	81.17
VIT_18s0122g00510.t01	Wine grape	cytosol	81.01	81.01
PGSC0003DMT400025919	Potato	cytosol	81.01	81.01
AT1G76550.1	Thale cress	cytosol	80.03	79.9
KRH49514	Soybean	cytosol, endoplasmic reticulum, nucleus	80.03	79.9
KRG89187	Soybean	endoplasmic reticulum	79.22	79.09
AT1G20950.1	Thale cress	cytosol	78.41	78.66
CDX87587	Canola	cytosol	78.25	78.12
CDX88295	Canola	cytosol	78.08	77.96
Bra015734.1-P	Field mustard	cytosol	77.92	77.8
CDY67203	Canola	cytosol	78.08	77.71
CDY67022	Canola	cytosol	78.08	77.71
Bra025858.1-P	Field mustard	cytosol	78.08	77.71
CDY33660	Canola	cytosol	75.0	77.26
CDX96611	Canola	cytosol	74.84	77.09
KXG34347	Sorghum	cytosol	64.94	64.72
KXG35340	Sorghum	cytosol	64.45	62.92
OQU80257	Sorghum	cytosol	54.06	62.13
Zm00001d004479_P001	Maize	mitochondrion	19.48	61.86
Zm00001d035883_P001	Maize	mitochondrion	9.42	60.42
Zm00001d015529_P001	Maize	mitochondrion	17.69	60.22
Zm00001d021503_P001	Maize	cytosol	27.92	59.72
Zm00001d008809_P001	Maize	cytosol	21.92	56.96
OQU89184	Sorghum	cytosol	9.09	45.16
EER89514	Sorghum	plastid	33.12	36.11
Zm00001d013450_P001	Maize	cytosol, plastid	15.26	32.3
Zm00001d037466_P002	Maize	cytosol	6.17	31.67

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	Gene3D:1.10.10.480
MapMan:2.1.1.1.2	Gene3D:3.40.50.450	Gene3D:3.40.50.460	EntrezGene:8071788	UniProt:C5XZX0	EnsemblPlants:EES05627
ProteinID:EES05627	ProteinID:EES05627.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003872
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0046835	GO:GO:0046872	GO:GO:0047334	GO:GO:0061615	HAMAP:MF_01980	PFAM:PF00365
PIRSF:PIRSF005677	InterPro:PKF_sf	PANTHER:PTHR43650	PANTHER:PTHR43650:SF3	MetaCyc:PWY-1042	MetaCyc:PWY-1861
MetaCyc:PWY-5484	MetaCyc:PWY-7385	InterPro:PfpB_PPi_PFK	InterPro:Phosphofructokinase_dom	EnsemblPlantsGene:SORBI_3004G261800	SUPFAM:SSF53784
unigene:Sbi.1977	TIGRFAMs:TIGR02477	UniParc:UPI0001A85D6A	RefSeq:XP_002452651.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:+:60689331..60694786

Molecular Weight (calculated)

67098.8 Da

IEP (calculated)

7.218

GRAVY (calculated)

-0.093

Length

616 amino acids

Sequence
(BLAST)

001: MDSDYGVPRE LSEVQKKRAL YQPELPPCLQ GTTVRVEYGD AAIAADPAGA HVISHVFPHT YGQPLAHFLR KTAVVPDAKV ISEHLAVRVG IVFCGRQSPG
101: GHNVVWGLYE AIKAHNQNSK LIGFLGGSDG LLAQRTLEIT DEVLASYKNQ GGYDMLGRTK DQIRTTEQVN GAMASCQALK LDALVIIGGV TSNTDAAQLA
201: ETFAEAKCAT KVVGVPVTLN GDLKNQFVET TVGFDTICKV NAQLISNMCT DALSAEKYYY FIRLMGRKAS HVALECALQS HPNMVILGEE VAASKLTIFD
301: ITKQICDAVQ ARAEKDKNHG VILIPEGLVE SIPELYALLQ EIHGLHGQGV SVENISSQLS PWASALFEFL PPFIRKQLLL HPESDDSAQL SQIETEKLLA
401: QLVETEMNRR LKEGTYKGKK FNAICHFFGY QARGALPSKF DCDYAYVLGH VCYHIIAAGL NGYMATVTNL KSPVNKWRCG AAPISSMMTV KRWSRGPSAT
501: QIGKPAVHMA SVDLKGKAYD VLRQNSSSFL LEDVYRNPGP LQFEGPGADS KPISLCVEDQ DYMGRIKKLQ EYLEKVKSIV KPGCSQDVLK AALSAMSSVT
601: ETLNIMTSSS AGQTLL

Best Arabidopsis Sequence Match ( AT1G76550.1 )
(BLAST)

001: MDSDFGIPRE LSPLQQLRSQ YHPELPPCLQ GTTVRVELGD GTTVAKAGDA HIIARAFPHT LGQPLAHFLR ATAKVADAQI ITEHPVKRVG IVFCGRQAPG
101: GHNVVWGLYE ALKVHNAKNT LLGFLGGSEG LFAQKTLEIT DEVLQTYKNQ GGYDMLGRTK DQIRTTEQVN AALKACTDLK LDSLVIIGGV TSNTDAAHLA
201: EFFAEAKCST KVVGVPVTIN GDLKNQFVEA NVGFDTTCKV NSQLISNICT DALSAEKYYY FVRLMGRKHS HVALECTLQS HPNMVILGEE VTASKLTIFD
301: IIKQICDAVQ ARAEQDKNHG VILIPEGLVE SIPELYALLK EIHGLLKEGV QVDNISTQLS SWSSALFEFL PPFIKKQLLL HPESDDSAQL SQIETEKLLA
401: YLVETEMNKR LKEGTYKGKK FNAICHFFGY QARGSLPSKF DCDYAYVLGH VCYHILAAGL NGYMATVTNL KSPVNKWKCG AAPISAMMTV KRWSQNSGST
501: TIGRPVIHPA SVDLKGKAYD LLRQNAQKFL MEDMYRNPGP VQYDGPGADA KAVSLCVEDQ DYMGKIKKLQ EYLDQVRTIV KPGCSQDVLK AALSVMASVT
601: DVLTTISSSS TSGQQFA

Arabidopsis Description

PFP-ALPHA2Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.