CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
extracellular 1
mitochondrion 2
cytosol 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER91893
EES01631
EES09201
EES16322
KXG29172
KXG37587
KXG37588
OQU78227
OQU84058

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G20950.1	EES01631	AT2G41100.1	17360592
AT1G20950.1	EES09201	AT2G41100.1	17360592
AT1G20950.1	EES16322	AT2G41100.1	17360592
AT1G20950.1	OQU78227	AT2G41100.1	17360592
AT1G20950.1	KXG37587	AT4G14640.1	17360592
AT1G20950.1	KXG37588	AT4G14640.1	17360592
AT1G20950.1	EER91893	AT5G65940.1	21798944
AT1G20950.1	KXG29172	AT5G65940.1	21798944
AT1G20950.1	OQU84058	AT5G65940.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032386_P003	Maize	cytosol	97.57	97.57
OQU80257	Sorghum	cytosol	79.77	91.98
Os08t0345700-01	Rice	extracellular	91.26	91.41
HORVU5Hr1G019030.9	Barley	cytosol	88.83	88.26
TraesCS5A01G072700.2	Wheat	cytosol, golgi	88.67	88.24
TraesCS5D01G085500.2	Wheat	golgi	88.67	82.53
TraesCS5B01G078300.1	Wheat	golgi	88.35	82.23
KXG35340	Sorghum	cytosol	78.32	76.7
GSMUA_Achr3P11650_001	Banana	cytosol	68.45	68.45
GSMUA_Achr1P06200_001	Banana	cytosol	68.28	68.4
KRH49514	Soybean	cytosol, endoplasmic reticulum, nucleus	66.99	67.1
KRG89187	Soybean	endoplasmic reticulum	66.83	66.94
VIT_18s0122g00510.t01	Wine grape	cytosol	66.34	66.56
Solyc12g095760.1.1	Tomato	cytosol, extracellular, nucleus, unclear	66.02	66.13
PGSC0003DMT400075360	Potato	cytosol	65.86	65.96
Solyc04g082880.2.1	Tomato	cytosol, nucleus, plastid, unclear	64.89	65.1
EES05627	Sorghum	cytosol	64.72	64.94
PGSC0003DMT400025919	Potato	cytosol	64.72	64.94
OQU76351	Sorghum	cytosol	64.72	64.41
CDX87587	Canola	cytosol	63.75	63.86
Bra015734.1-P	Field mustard	cytosol	63.59	63.7
CDX88295	Canola	cytosol	63.43	63.53
AT1G76550.1	Thale cress	cytosol	63.11	63.21
Bra025858.1-P	Field mustard	cytosol	63.11	63.0
CDY67203	Canola	cytosol	63.11	63.0
CDY67022	Canola	cytosol	62.95	62.84
CDX96611	Canola	cytosol	60.52	62.54
CDY33660	Canola	cytosol	60.52	62.54
AT1G20950.1	Thale cress	cytosol	61.97	62.38
OQU89184	Sorghum	cytosol	10.68	53.23
EER89514	Sorghum	plastid	34.63	37.88

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	Gene3D:1.10.10.480
MapMan:2.1.1.1.2	Gene3D:3.40.50.450	Gene3D:3.40.50.460	UniProt:A0A1B6Q8W1	InterPro:ATP_PFK	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003872	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006002	GO:GO:0006091
GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0046835	GO:GO:0046872
GO:GO:0047334	GO:GO:0061615	EnsemblPlants:KXG34347	ProteinID:KXG34347	ProteinID:KXG34347.1	HAMAP:MF_01980
PFAM:PF00365	InterPro:PKF_sf	PRINTS:PR00476	PANTHER:PTHR43650	PANTHER:PTHR43650:SF5	MetaCyc:PWY-1042
MetaCyc:PWY-1861	MetaCyc:PWY-5484	MetaCyc:PWY-7385	InterPro:PfpB_PPi_PFK	InterPro:Phosphofructokinase_dom	EnsemblPlantsGene:SORBI_3002G026300
SUPFAM:SSF53784	TIGRFAMs:TIGR02477	UniParc:UPI0001FCD353	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:-:2412425..2418654

Molecular Weight (calculated)

67397.5 Da

IEP (calculated)

7.233

GRAVY (calculated)

-0.032

Length

618 amino acids

Sequence
(BLAST)

001: MNADFGAPKE LAGGLQHRRA LYQPPLPPCL QGPTVRAEYG DATTTIDPTC AQAVAQAFPH TFGQPLVSFV APSADAAAAE ERHPIRVGVV FSGRQSPGGH
101: NVVWGLHDAL KAYNPQSVLY GFVGGTEGLF ANKTLVLTDD VLASYKNQGG FDLLGRSIDQ IRTTKQVNAA MTTCRSLNLD GLVIIGGVTS NSDAAQLAET
201: LIQNNCKTKV VGVPVSLNGD LKNQFVETTV GFDTVCKVNS QLVSNVCLDA ISAGKYYYFV RLMGRKASHV AFECALQSHP NMLILGEEVA LSKLTLMEII
301: NKICDGVQAR AELGKYHGVL VIPEGLIESI PEMYALIQEI NILHNNNVPV AEMSSQLSPW AAALFQFLPP FIRRELLLHQ ESDNSAQLSQ IDTEQLLAHL
401: VETEMIKRTK EGRYKGRKFS SVCHFFGYQA RGSIPSNFDC DYAYALGRIS LHMITVGLTG YMATVANLKD PVDKWRCAAA PLTAMMSVKR HLRGPGAIPI
501: GRPSIHPSPI DLKGKAYELL REKASSFLLD DFYRTPGGIQ FEGPGSDAKP ITLTIENQDY MGDIEILKEY LGKVRTMVKP GCSREILKAA ISSMVSVTDV
601: LTVMSHPLNT ELPLYHFK

Best Arabidopsis Sequence Match ( AT1G76550.1 )
(BLAST)

001: MDSDFGIPRE LSPLQQLRSQ YHPELPPCLQ GTTVRVELGD GTTVAKAGDA HIIARAFPHT LGQPLAHFLR ATAKVADAQI ITEHPVKRVG IVFCGRQAPG
101: GHNVVWGLYE ALKVHNAKNT LLGFLGGSEG LFAQKTLEIT DEVLQTYKNQ GGYDMLGRTK DQIRTTEQVN AALKACTDLK LDSLVIIGGV TSNTDAAHLA
201: EFFAEAKCST KVVGVPVTIN GDLKNQFVEA NVGFDTTCKV NSQLISNICT DALSAEKYYY FVRLMGRKHS HVALECTLQS HPNMVILGEE VTASKLTIFD
301: IIKQICDAVQ ARAEQDKNHG VILIPEGLVE SIPELYALLK EIHGLLKEGV QVDNISTQLS SWSSALFEFL PPFIKKQLLL HPESDDSAQL SQIETEKLLA
401: YLVETEMNKR LKEGTYKGKK FNAICHFFGY QARGSLPSKF DCDYAYVLGH VCYHILAAGL NGYMATVTNL KSPVNKWKCG AAPISAMMTV KRWSQNSGST
501: TIGRPVIHPA SVDLKGKAYD LLRQNAQKFL MEDMYRNPGP VQYDGPGADA KAVSLCVEDQ DYMGKIKKLQ EYLDQVRTIV KPGCSQDVLK AALSVMASVT
601: DVLTTISSSS TSGQQFA

Arabidopsis Description

PFP-ALPHA2Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.