Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G29480.1 | CDX96611 | AT1G20950.1 | 21798944 |
| AT2G29480.1 | CDY33660 | AT1G20950.1 | 21798944 |
| AT2G29480.1 | CDY67022 | AT1G20950.1 | 21798944 |
| AT2G29480.1 | CDY67203 | AT1G20950.1 | 21798944 |
| AT2G29480.1 | CDY41709 | AT5G22355.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039984.1-P | Field mustard | cytosol | 95.98 | 96.85 |
| CDX97882 | Canola | cytosol | 93.3 | 93.3 |
| AT2G29480.1 | Thale cress | cytosol | 85.71 | 85.33 |
| CDY51366 | Canola | cytosol | 74.55 | 74.55 |
| CDY45446 | Canola | cytosol | 73.66 | 73.66 |
| CDX97884 | Canola | cytosol | 73.66 | 73.66 |
| CDY53373 | Canola | cytosol | 72.32 | 72.32 |
| CDX97883 | Canola | cytosol | 70.09 | 68.86 |
| CDY51365 | Canola | cytosol | 69.64 | 68.42 |
| VIT_06s0004g05680.t01 | Wine grape | cytosol | 33.04 | 67.89 |
| CDY40167 | Canola | cytosol | 66.96 | 66.96 |
| VIT_06s0004g05710.t01 | Wine grape | cytosol | 23.21 | 66.67 |
| CDY45445 | Canola | cytosol | 66.07 | 66.07 |
| CDX83309 | Canola | cytosol | 65.62 | 65.62 |
| CDY72138 | Canola | cytosol | 65.18 | 65.18 |
| CDY18883 | Canola | cytosol, extracellular | 48.66 | 64.88 |
| CDY01992 | Canola | cytosol, vacuole | 30.8 | 55.2 |
| CDY51369 | Canola | cytosol | 53.12 | 52.89 |
| CDX97887 | Canola | cytosol | 52.23 | 52.0 |
| VIT_06s0004g05700.t01 | Wine grape | cytosol | 49.11 | 50.0 |
| VIT_14s0060g02170.t01 | Wine grape | cytosol | 47.32 | 45.89 |
| CDY22184 | Canola | cytosol | 45.09 | 44.69 |
| CDX86895 | Canola | cytosol | 38.39 | 36.75 |
| CDY59707 | Canola | cytosol | 37.95 | 36.64 |
| CDY00291 | Canola | cytosol | 37.5 | 35.9 |
| CDX73100 | Canola | cytosol | 35.27 | 34.05 |
| CDX73101 | Canola | cytosol | 34.38 | 33.19 |
| CDX96555 | Canola | cytosol | 33.93 | 32.62 |
| VIT_06s0004g05670.t01 | Wine grape | cytosol | 50.0 | 31.82 |
Protein Annotations
| Gene3D:1.20.1050.10 | MapMan:18.8.1.4 | Gene3D:3.40.30.10 | UniProt:A0A078IPK7 | EnsemblPlants:CDY51364 | ProteinID:CDY51364 |
| ProteinID:CDY51364.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00003271001 |
| InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 | InterPro:IPR010987 | PFAM:PF02798 |
| PFAM:PF13410 | PFscan:PS50404 | PFscan:PS50405 | PANTHER:PTHR11260 | PANTHER:PTHR11260:SF486 | SUPFAM:SSF47616 |
| SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | UniParc:UPI0004EDBEEF | : | : | : |
Description
BnaA04g28580DBnaA04g28580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IPK7]
Coordinates
chrLK032988:+:40633..41486
Molecular Weight (calculated)
25971.1 Da
IEP (calculated)
6.529
GRAVY (calculated)
-0.169
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKKEECVKL LGFWISPFSR RVEMALKLKG VPYEYLEEDL PKKTPLLLEL NPVHKKVPVL VHNDKILSES HVILEYIDQT WSNNPFLPQD PYEKAMARFW
101: AKFVDEQILA AGFMPLIKPK KGIEVAIEET RELIMFLEKE VTGKDFFGGE TIGFLDMVAG TMIPFCLVRA WECMGIDMIS EEKFPGLSRW IKKLNEVEIV
201: RECIPPKEKH IERMNKIIEK SKSS
101: AKFVDEQILA AGFMPLIKPK KGIEVAIEET RELIMFLEKE VTGKDFFGGE TIGFLDMVAG TMIPFCLVRA WECMGIDMIS EEKFPGLSRW IKKLNEVEIV
201: RECIPPKEKH IERMNKIIEK SKSS
001: MAKKEESVKL LGFWISPFSR RVEMALKLKG VPYEYLEEDL PKKSTLLLEL NPVHKKVPVL VHNDKLLSES HVILEYIDQT WNNNPILPHD PYEKAMVRFW
101: AKFVDEQILP VGFMPLVKAE KGIDVAIEEI REMLMFLEKE VTGKDFFGGK TIGFLDMVAG SMIPFCLARA WECLGIDMTP EDTFPELNRW IKNLNEVEIV
201: RECIPPKEKH IERMKKIIER AKSTF
101: AKFVDEQILP VGFMPLVKAE KGIDVAIEEI REMLMFLEKE VTGKDFFGGK TIGFLDMVAG SMIPFCLARA WECLGIDMTP EDTFPELNRW IKNLNEVEIV
201: RECIPPKEKH IERMKKIIER AKSTF
Arabidopsis Description
GSTU2Glutathione S-transferase U2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW29]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.