Factsheet for Bra039984.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, vacuole
BaCelLo:	cytosol
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra025858.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G29480.1	Bra025858.1-P	AT1G20950.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51364	Canola	cytosol	96.85	95.98
AT2G29480.1	Thale cress	cytosol	87.84	86.67
Bra039982.1-P	Field mustard	cytosol	74.77	74.11
Bra039983.1-P	Field mustard	cytosol	70.72	68.86
VIT_06s0004g05680.t01	Wine grape	cytosol	33.78	68.81
VIT_06s0004g05710.t01	Wine grape	cytosol	23.42	66.67
Bra000474.1-P	Field mustard	cytosol	66.22	65.62
Bra018386.1-P	Field mustard	cytosol	66.22	65.62
Bra018385.1-P	Field mustard	cytosol	52.25	61.05
Bra039980.1-P	Field mustard	cytosol	52.7	52.0
VIT_06s0004g05700.t01	Wine grape	cytosol	49.55	50.0
VIT_14s0060g02170.t01	Wine grape	cytosol	47.75	45.89
Bra034061.1-P	Field mustard	cytosol	45.95	45.13
Bra008157.1-P	Field mustard	cytosol	37.39	35.78
Bra010088.1-P	Field mustard	cytosol	37.39	35.47
VIT_06s0004g05670.t01	Wine grape	cytosol	51.35	32.39
Bra015901.1-P	Field mustard	cytosol	33.78	32.33

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra039984	EnsemblPlants:Bra039984.1	EnsemblPlants:Bra039984.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf
InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	UniProt:M4FFW0	PFAM:PF02798	PFAM:PF13410
PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF486	SUPFAM:SSF47616	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI000254440B	:	:	:	:

Description

AT2G29480 (E=4e-114) ATGSTU2, GST20 | ATGSTU2 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 2); glutathione transferase

Coordinates

chrA04:-:13225600..13226496

Molecular Weight (calculated)

25801.0 Da

IEP (calculated)

6.533

GRAVY (calculated)

-0.190

Length

222 amino acids

Sequence
(BLAST)

001: MAKKEESVKL LGFWISPFSR RVEMALKLKG VPYEYLEEDL PKKTPLLLEL NPVHKKVPVL VHNDKILSES HVILEYIDQT WSNNPILPQD PYEKAMARFW
101: AKFVDEQILP AGFMPLVKPK KGIEVAIEET RELIMFLEKE VTGKDFFGGE TIGFLDMVAG TMIPFCLVRA WECMGIDMIS EEKFPGLSRW IKKLNEVEIV
201: RECIPPKEKH IERMNKIIER KT

Best Arabidopsis Sequence Match ( AT2G29480.1 )
(BLAST)

001: MAKKEESVKL LGFWISPFSR RVEMALKLKG VPYEYLEEDL PKKSTLLLEL NPVHKKVPVL VHNDKLLSES HVILEYIDQT WNNNPILPHD PYEKAMVRFW
101: AKFVDEQILP VGFMPLVKAE KGIDVAIEEI REMLMFLEKE VTGKDFFGGK TIGFLDMVAG SMIPFCLARA WECLGIDMTP EDTFPELNRW IKNLNEVEIV
201: RECIPPKEKH IERMKKIIER AKSTF

Arabidopsis Description

GSTU2Glutathione S-transferase U2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW29]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.