CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, vacuole
BaCelLo:	cytosol
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000474.1-P	Field mustard	cytosol	100.0	100.0
CDY72138	Canola	cytosol	99.11	99.11
CDY40167	Canola	cytosol	92.41	92.41
CDY45445	Canola	cytosol	91.96	91.96
AT2G29450.1	Thale cress	cytosol	87.5	87.5
CDY01992	Canola	cytosol, vacuole	48.66	87.2
VIT_06s0004g05680.t01	Wine grape	cytosol	34.38	70.64
VIT_06s0004g05710.t01	Wine grape	cytosol	24.55	70.51
CDX97882	Canola	cytosol	66.96	66.96
CDY51364	Canola	cytosol	65.62	65.62
CDY53373	Canola	cytosol	65.18	65.18
CDY45446	Canola	cytosol	64.73	64.73
CDY51366	Canola	cytosol	64.29	64.29
CDX97884	Canola	cytosol	62.5	62.5
CDX97883	Canola	cytosol	61.16	60.09
CDY51365	Canola	cytosol	60.27	59.21
CDX97887	Canola	cytosol	53.57	53.33
CDY51369	Canola	cytosol	53.57	53.33
CDY18883	Canola	cytosol, extracellular	38.84	51.79
VIT_06s0004g05700.t01	Wine grape	cytosol	47.77	48.64
CDY22184	Canola	cytosol	45.09	44.69
VIT_14s0060g02170.t01	Wine grape	cytosol	43.75	42.42
CDY00291	Canola	cytosol	39.73	38.03
CDX86895	Canola	cytosol	39.73	38.03
CDY59707	Canola	cytosol	37.5	36.21
CDX73100	Canola	cytosol	35.71	34.48
CDX73101	Canola	cytosol	34.82	33.62
CDX96555	Canola	cytosol	34.38	33.05
VIT_06s0004g05670.t01	Wine grape	cytosol	50.0	31.82

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EnsemblPlants:CDX83309	ProteinID:CDX83309	ProteinID:CDX83309.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00138867001	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf
InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF13417	PFscan:PS50404	PFscan:PS50405
PANTHER:PTHR11260	PANTHER:PTHR11260:SF486	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000253FFA1

Description

BnaA03g21970D

Coordinates

chrLK031832:-:970079..971007

Molecular Weight (calculated)

25719.5 Da

IEP (calculated)

6.378

GRAVY (calculated)

-0.286

Length

224 amino acids

Sequence
(BLAST)

001: MAEKEEVKLL GIWASPFSRR IEMALKLKGI PYDYVEEILE HKSPLLLALN PIHKKVPVLV HNGKTILESQ VILEYIDETW KQNPLLPQDP YERSKARFLA
101: KLVDEQIITA GFVSMARADE KGREALAEQT RELIMNLEKE LVGKDFFGGK SVGFLDLVAG SMIPFCLERG WEGIGLKVIT EEKFPEYSRW VKNLEKVEAV
201: KDCIPPREKH VEHMNYMGER IRSA

Best Arabidopsis Sequence Match ( AT2G29450.1 )
(BLAST)

001: MAEKEEVKLL GIWASPFSRR VEMALKLKGI PYEYVEEILE NKSPLLLALN PIHKKVPVLV HNGKTILESH VILEYIDETW PQNPILPQDP YERSKARFFA
101: KLVDEQIMNV GFISMARADE KGREVLAEQV RELIMYLEKE LVGKDYFGGK TVGFLDFVAG SLIPFCLERG WEGIGLEVIT EEKFPEFKRW VRNLEKVEIV
201: KDCVPPREEH VEHMNYMAER VRSS

Arabidopsis Description

GSTU5GSTU5 [Source:UniProtKB/TrEMBL;Acc:A0A178VPP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.