CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000474.1-P	Field mustard	cytosol	99.11	99.11
CDX83309	Canola	cytosol	99.11	99.11
CDY40167	Canola	cytosol	91.52	91.52
CDY45445	Canola	cytosol	91.07	91.07
AT2G29450.1	Thale cress	cytosol	87.5	87.5
CDY01992	Canola	cytosol, vacuole	48.66	87.2
VIT_06s0004g05680.t01	Wine grape	cytosol	34.38	70.64
VIT_06s0004g05710.t01	Wine grape	cytosol	24.55	70.51
CDX97882	Canola	cytosol	66.96	66.96
CDY51364	Canola	cytosol	65.18	65.18
CDY53373	Canola	cytosol	65.18	65.18
CDY45446	Canola	cytosol	64.73	64.73
CDY51366	Canola	cytosol	64.29	64.29
CDX97884	Canola	cytosol	62.5	62.5
CDX97883	Canola	cytosol	61.16	60.09
CDY51365	Canola	cytosol	60.27	59.21
CDY51369	Canola	cytosol	53.57	53.33
CDX97887	Canola	cytosol	53.57	53.33
CDY18883	Canola	cytosol, extracellular	38.84	51.79
VIT_06s0004g05700.t01	Wine grape	cytosol	47.32	48.18
CDY22184	Canola	cytosol	44.2	43.81
VIT_14s0060g02170.t01	Wine grape	cytosol	43.75	42.42
CDY00291	Canola	cytosol	38.84	37.18
CDX86895	Canola	cytosol	38.84	37.18
CDY59707	Canola	cytosol	37.05	35.78
CDX73100	Canola	cytosol	35.71	34.48
CDX73101	Canola	cytosol	34.82	33.62
CDX96555	Canola	cytosol	34.38	33.05
VIT_06s0004g05670.t01	Wine grape	cytosol	50.0	31.82

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	UniProt:A0A078JWW3	EnsemblPlants:CDY72138	ProteinID:CDY72138
ProteinID:CDY72138.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00025200001	InterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF13417	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF486	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI0004EE5FBE	:	:	:	:	:

Description

BnaCnng76180DBnaCnng76180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JWW3]

Coordinates

chrLK049179:-:385..1385

Molecular Weight (calculated)

25705.4 Da

IEP (calculated)

6.378

GRAVY (calculated)

-0.292

Length

224 amino acids

Sequence
(BLAST)

001: MAEKEEVKLL GIWASPFSRR IEMALKLKGI PYDYVEEILE HKSPLLLALN PIHKKVPVLV HNGKTILESQ VILEYIDETW KQNPILPQDP YERSKARFLG
101: KLVDEQIITA GFVSMARADE KGREALAEQT RELIMNLEKE LVGKDFFGGK SVGFLDLVAG SMIPFCLERG WEGIGLKVIT EEKFPEYSRW VKNLEKVEAV
201: KDCIPPREKH VEHMNYMGER IRSA

Best Arabidopsis Sequence Match ( AT2G29450.1 )
(BLAST)

001: MAEKEEVKLL GIWASPFSRR VEMALKLKGI PYEYVEEILE NKSPLLLALN PIHKKVPVLV HNGKTILESH VILEYIDETW PQNPILPQDP YERSKARFFA
101: KLVDEQIMNV GFISMARADE KGREVLAEQV RELIMYLEKE LVGKDYFGGK TVGFLDFVAG SLIPFCLERG WEGIGLEVIT EEKFPEFKRW VRNLEKVEIV
201: KDCVPPREEH VEHMNYMAER VRSS

Arabidopsis Description

GSTU5GSTU5 [Source:UniProtKB/TrEMBL;Acc:A0A178VPP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.