CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 2
plastid 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH54213	Soybean	cytosol	96.1	96.1
CDX83160	Canola	cytosol	75.15	76.57
CDY34036	Canola	plasma membrane	74.74	76.15
Bra000622.1-P	Field mustard	plastid	74.54	75.94
Os12t0236500-01	Rice	cytosol	74.13	75.52
AT5G60160.1	Thale cress	cytosol	73.92	75.47
EES03335	Sorghum	cytosol	73.51	75.37
TraesCS5D01G215200.2	Wheat	cytosol, golgi, unclear	72.69	75.0
VIT_17s0000g01740.t01	Wine grape	cytosol	74.54	74.85
TraesCS5B01G207200.1	Wheat	cytosol	72.48	74.79
TraesCS5A01G208900.2	Wheat	cytosol	72.48	74.79
PGSC0003DMT400039280	Potato	cytosol	74.13	74.74
Zm00001d044102_P002	Maize	cytosol	72.9	74.58
GSMUA_Achr10P...	Banana	cytosol	72.69	74.37
Solyc03g111180.2.1	Tomato	extracellular, nucleus	72.9	73.65
GSMUA_Achr6P12430_001	Banana	cytosol	71.05	72.69
HORVU5Hr1G061530.3	Barley	cytosol	72.69	69.41
KRH34755	Soybean	cytosol	17.25	64.62
KRG92030	Soybean	cytosol	54.83	49.54
KRH34756	Soybean	extracellular, vacuole	17.45	45.95
VIT_05s0020g00180.t01	Wine grape	plastid	15.61	28.79

Protein Annotations

EntrezGene:100776903	MapMan:19.4.5.6.4	Gene3D:2.30.250.10	Gene3D:3.40.630.10	EMBL:ACUP02002709	EnsemblPlantsGene:GLYMA_04G194100
GO:GO:0003674	GO:GO:0003824	GO:GO:0004177	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006508	GO:GO:0006518	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0008237	GO:GO:0008270	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0046872	GO:GO:0070006	UniProt:I1JXH8	InterPro:IPR023358	EnsemblPlants:KRH63732	ProteinID:KRH63732
ProteinID:KRH63732.1	MEROPS:M18.A01	PFAM:PF02127	PRINTS:PR00932	PANTHER:PTHR28570	InterPro:Peptidase_M18
InterPro:Peptidase_M18_dom2	SUPFAM:SSF101821	SUPFAM:SSF53187	UniParc:UPI0002339379	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:-:46572316..46583276

Molecular Weight (calculated)

53271.4 Da

IEP (calculated)

6.690

GRAVY (calculated)

-0.198

Length

487 amino acids

Sequence
(BLAST)

001: MAAELDSHAV ASDMIDFLNA SPTAFHAVDE AKRRLRSAGY HQLSEREPWK LQPGNKYFFT RNHSTIVAFA IGKKYVSGNG FHIIGAHTDS PCLKLKPVTK
101: VVKAGILEVG VQTYGGGLWH TWFDRDLTVA GRVIVQEENA GSVSYSHRLV RIEEPIMRIP TLAIHLDKTV SDGFKFNNET HLIPILATSL KGELNKVSTE
201: NGPVESGNQN DGKKANDKTG TSNTKHHLLL LQLLASKLGC EPDDICDFEL QACDTQPSTI AGAAKEFIFS GRLDNLCMSF CSLKALIDAT SSDSSLEEES
301: GVRMVALFDH EEVGSNSAQG AGSPVMLNAV TRVTNSFSSN PNLLEKAVQL SYLVSADMAH ALHPNYMEKH EANHQPKLHG GLVIKTNANQ RYATNVVTSF
401: IFREIASKHK LPVQDFVVRN DMGCGSTIGP ILASGIGIRT VDVGAPQLSM HSIREICAVD DVKHSYEHFK AFYEEFSHVD GKMVVDI

Best Arabidopsis Sequence Match ( AT5G60160.1 )
(BLAST)

001: MDKSSLVSDF LSFLNASPTA FHAVDESKRR LLKAGYEQIS ERDDWKLEAG KKYFFTRNYS TIVAFAIGHK YVAGNGFHII GAHTDSPCLK LKPVSKITKG
101: GCLEVGVQTY GGGLWYTWFD RDLTVAGRVI LKEEKAGSVS YSHRLVRIED PIMRIPTLAI HLDRNVNTEG FKPNTQTHLV PVLATAIKAE LNKTPAESGE
201: HDEGKKCAET SSKSKHHPLL MEIIANALGC KPEEICDFEL QACDTQPSIL AGAAKEFIFS GRLDNLCMSF CSLKALIDAT SSGSDLEDES GIRMVALFDH
301: EEVGSNSAQG AGSPVMIDAM SHITSCFSSD TKVLKKAIQK SLLVSADMAH ALHPNFMDKH EENHQPKMHG GLVIKHNANQ RYATNAVTSF VFREIAEKHN
401: LPVQDFVVRN DMGCGSTIGP ILASSVGIRT VDVGAPQLSM HSIREMCAAD DVKHSYEHFK AFFQEFTHLD AKLTIDV

Arabidopsis Description

AT5g60160/f15l12_20 [Source:UniProtKB/TrEMBL;Acc:Q9LST0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.