Factsheet for HORVU5Hr1G061530.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G215200.2	Wheat	cytosol, golgi, unclear	89.41	96.61
TraesCS5A01G208900.2	Wheat	cytosol	89.02	96.19
TraesCS5B01G207200.1	Wheat	cytosol	88.63	95.76
Os12t0236500-01	Rice	cytosol	82.35	87.87
Zm00001d044102_P002	Maize	cytosol	81.96	87.82
EES03335	Sorghum	cytosol	81.18	87.16
GSMUA_Achr6P12430_001	Banana	cytosol	71.57	76.68
GSMUA_Achr10P...	Banana	cytosol	70.59	75.63
KRH63732	Soybean	cytosol	69.41	72.69
KRH54213	Soybean	cytosol	69.22	72.48
AT5G60160.1	Thale cress	cytosol	67.45	72.12
Bra000622.1-P	Field mustard	plastid	67.45	71.97
CDY34036	Canola	plasma membrane	67.25	71.76
CDX83160	Canola	cytosol	67.25	71.76
VIT_17s0000g01740.t01	Wine grape	cytosol	67.06	70.52
Solyc03g111180.2.1	Tomato	extracellular, nucleus	66.47	70.33
PGSC0003DMT400039280	Potato	cytosol	66.27	69.98
HORVU2Hr1G082840.1	Barley	plastid	18.82	56.47
HORVU3Hr1G113340.1	Barley	cytosol, plastid	55.1	53.12
HORVU2Hr1G060310.2	Barley	cytosol	23.73	48.59
VIT_05s0020g00180.t01	Wine grape	plastid	13.73	26.52

Protein Annotations

MapMan:19.4.5.6.4	Gene3D:2.30.250.10	Gene3D:3.40.630.10	UniProt:A0A287RG91	GO:GO:0003674	GO:GO:0003824
GO:GO:0004177	GO:GO:0005488	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0008237	GO:GO:0008270	GO:GO:0016787	GO:GO:0019538	GO:GO:0046872	EnsemblPlantsGene:HORVU5Hr1G061530
EnsemblPlants:HORVU5Hr1G061530.3	InterPro:IPR023358	PFAM:PF02127	PRINTS:PR00932	PANTHER:PTHR28570	InterPro:Peptidase_M18
InterPro:Peptidase_M18_dom2	SUPFAM:SSF101821	SUPFAM:SSF53187	TMHMM:TMhelix	UniParc:UPI000B46DBE6	:

Description

No Description!

Coordinates

chrchr5H:+:480973285..480984107

Molecular Weight (calculated)

56172.2 Da

IEP (calculated)

7.014

GRAVY (calculated)

-0.200

Length

510 amino acids

Sequence
(BLAST)

001: TRYGGAKHTT PLRSDRSCFL HSSHLHGSAP AASRLPPPMA AVVSDLVDFL NASPTAFHAV DEAKRLLKAA GFEQLSEREE WTGLQPGRKY FFTRNHSAIV
101: AFAIGAKYVA GNGFHIIGAH TDSPCLKLKP VTKITKGGCL EVGVQTYGGG LWYTWFDRDL TIAGRVLVRQ KKEGVVSYGH KLVRVQEPIM RIPTLAIHLD
201: RTISSEGLKI NNQNHLVPVL GTLVKYEMQK LVEGNVPRES SGGENSKHHP LLLQLIAREA NCEVDEICDF ELQLCDTQPS VIAGAMKEFI FSGRLDNLGM
301: SFCSLKALVE STSTDHSLDH ESGVRMVALF DHEEVGSDSA QGAGSPAMLD ALTRITGCFN HSNSKLLEKA IQRSFLVSAD MAHALHPNYM EKHEENHQPK
401: LHGGLVIKHN ANQRYATNAV TAFIFREIAE RHQLPIQDFV VRNDMACGST IGPILASGVG IRTVDVGAPQ LSMHSIREMC AVDDISHSYE HFKAYFEEFT
501: ELDNKVKVDC

Best Arabidopsis Sequence Match ( AT5G60160.1 )
(BLAST)

001: MDKSSLVSDF LSFLNASPTA FHAVDESKRR LLKAGYEQIS ERDDWKLEAG KKYFFTRNYS TIVAFAIGHK YVAGNGFHII GAHTDSPCLK LKPVSKITKG
101: GCLEVGVQTY GGGLWYTWFD RDLTVAGRVI LKEEKAGSVS YSHRLVRIED PIMRIPTLAI HLDRNVNTEG FKPNTQTHLV PVLATAIKAE LNKTPAESGE
201: HDEGKKCAET SSKSKHHPLL MEIIANALGC KPEEICDFEL QACDTQPSIL AGAAKEFIFS GRLDNLCMSF CSLKALIDAT SSGSDLEDES GIRMVALFDH
301: EEVGSNSAQG AGSPVMIDAM SHITSCFSSD TKVLKKAIQK SLLVSADMAH ALHPNFMDKH EENHQPKMHG GLVIKHNANQ RYATNAVTSF VFREIAEKHN
401: LPVQDFVVRN DMGCGSTIGP ILASSVGIRT VDVGAPQLSM HSIREMCAAD DVKHSYEHFK AFFQEFTHLD AKLTIDV

Arabidopsis Description

AT5g60160/f15l12_20 [Source:UniProtKB/TrEMBL;Acc:Q9LST0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.