Factsheet for PGSC0003DMT400039280

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g111180.2.1	Tomato	extracellular, nucleus	93.37	93.57
VIT_17s0000g01740.t01	Wine grape	cytosol	77.23	76.91
AT5G60160.1	Thale cress	cytosol	74.33	75.26
KRH63732	Soybean	cytosol	74.74	74.13
KRH54213	Soybean	cytosol	74.74	74.13
CDX83160	Canola	cytosol	73.29	74.06
CDY34036	Canola	plasma membrane	73.29	74.06
Zm00001d044102_P002	Maize	cytosol	72.88	73.95
Bra000622.1-P	Field mustard	plastid	73.08	73.85
EES03335	Sorghum	cytosol	72.46	73.68
GSMUA_Achr6P12430_001	Banana	cytosol	72.46	73.53
GSMUA_Achr10P...	Banana	cytosol	72.26	73.32
Os12t0236500-01	Rice	cytosol	71.84	72.59
TraesCS5D01G215200.2	Wheat	cytosol, golgi, unclear	69.98	71.61
TraesCS5A01G208900.2	Wheat	cytosol	69.77	71.4
TraesCS5B01G207200.1	Wheat	cytosol	69.77	71.4
HORVU5Hr1G061530.3	Barley	cytosol	69.98	66.27
VIT_05s0020g00180.t01	Wine grape	plastid	14.08	25.76

Protein Annotations

EntrezGene:102588156	MapMan:19.4.5.6.4	Gene3D:2.30.250.10	Gene3D:3.40.630.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004177	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005774	GO:GO:0005829	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0008237	GO:GO:0008270	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787
GO:GO:0019538	GO:GO:0046686	GO:GO:0046872	GO:GO:0061077	GO:GO:0070006	InterPro:IPR023358
MEROPS:M18.A01	UniProt:M1B818	PFAM:PF02127	EnsemblPlantsGene:PGSC0003DMG400015189	PGSC:PGSC0003DMG400015189	EnsemblPlants:PGSC0003DMT400039280
PRINTS:PR00932	PANTHER:PTHR28570	PANTHER:PTHR28570:SF3	InterPro:Peptidase_M18	InterPro:Peptidase_M18_dom2	SUPFAM:SSF101821
SUPFAM:SSF53187	UniParc:UPI000294B697	RefSeq:XP_006351481.1	SEG:seg	:	:

Description

Aspartyl aminopeptidase [Source:PGSC_GENE;Acc:PGSC0003DMG400015189]

Coordinates

chr3:-:50793836..50801875

Molecular Weight (calculated)

52810.0 Da

IEP (calculated)

6.855

GRAVY (calculated)

-0.180

Length

483 amino acids

Sequence
(BLAST)

001: MESSAVAADL VDFLNASPTA FHAVDEAKKR LKSAGYVQID EKQDWVLKAG NKYFFTRNYS TIVAFAIGKK YVGGNGFHIV GAHTDSPCLK LKPVSKVIKS
101: GFLEVGVQTY GGGLWHTWFD RDLTVAGRMI IRNKKDGSES YLHKLVRIEE PIMRIPTLAI HLERGVNDGF KVNTQTHLLP VLATSIKAEL NKPASIDDSI
201: GNGAPNDGSK SSKRINPGGE QHHSLLLQLL AAQAGCEPGD ICDFELQACD TQPSIIAGAM KEFVFSGRLD NLCMSFCSLK ALIDATSPEN SLEDEVGVRM
301: VALFDHEEVG SNSAQGAGSP VMFDALSRIT STFGPDSKLI QKAIQKSFLV SADMAHALHP NYPDKHEENH QPKFHGGLVI KHNANQRYAT NAITSFVFRE
401: IASKHNIPLQ DFVIRNDMPC GSTIGPILAS GVGIRTVDVG APQWSMHSIR EMCAVDDVKH SYEHFKAFFQ DFSQLDGKIA VDI

Best Arabidopsis Sequence Match ( AT5G60160.1 )
(BLAST)

001: MDKSSLVSDF LSFLNASPTA FHAVDESKRR LLKAGYEQIS ERDDWKLEAG KKYFFTRNYS TIVAFAIGHK YVAGNGFHII GAHTDSPCLK LKPVSKITKG
101: GCLEVGVQTY GGGLWYTWFD RDLTVAGRVI LKEEKAGSVS YSHRLVRIED PIMRIPTLAI HLDRNVNTEG FKPNTQTHLV PVLATAIKAE LNKTPAESGE
201: HDEGKKCAET SSKSKHHPLL MEIIANALGC KPEEICDFEL QACDTQPSIL AGAAKEFIFS GRLDNLCMSF CSLKALIDAT SSGSDLEDES GIRMVALFDH
301: EEVGSNSAQG AGSPVMIDAM SHITSCFSSD TKVLKKAIQK SLLVSADMAH ALHPNFMDKH EENHQPKMHG GLVIKHNANQ RYATNAVTSF VFREIAEKHN
401: LPVQDFVVRN DMGCGSTIGP ILASSVGIRT VDVGAPQLSM HSIREMCAAD DVKHSYEHFK AFFQEFTHLD AKLTIDV

Arabidopsis Description

AT5g60160/f15l12_20 [Source:UniProtKB/TrEMBL;Acc:Q9LST0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.