CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044102_P002	Maize	cytosol	95.79	95.59
Os12t0236500-01	Rice	cytosol	91.79	91.21
TraesCS5D01G215200.2	Wheat	cytosol, golgi, unclear	88.21	88.77
TraesCS5B01G207200.1	Wheat	cytosol	87.79	88.35
TraesCS5A01G208900.2	Wheat	cytosol	87.79	88.35
HORVU5Hr1G061530.3	Barley	cytosol	87.16	81.18
GSMUA_Achr10P...	Banana	cytosol	79.79	79.62
GSMUA_Achr6P12430_001	Banana	cytosol	79.79	79.62
Bra000622.1-P	Field mustard	plastid	75.79	75.31
CDY34036	Canola	plasma membrane	75.58	75.1
CDX83160	Canola	cytosol	75.58	75.1
VIT_17s0000g01740.t01	Wine grape	cytosol	76.21	74.64
AT5G60160.1	Thale cress	cytosol	74.95	74.63
KRH63732	Soybean	cytosol	75.37	73.51
KRH54213	Soybean	cytosol	75.37	73.51
PGSC0003DMT400039280	Potato	cytosol	73.68	72.46
Solyc03g111180.2.1	Tomato	extracellular, nucleus	73.47	72.41
EES02126	Sorghum	mitochondrion	58.11	52.67
VIT_05s0020g00180.t01	Wine grape	plastid	14.95	26.89

Protein Annotations

MapMan:19.4.5.6.4	Gene3D:2.30.250.10	Gene3D:3.40.630.10	EntrezGene:8058217	UniProt:C5XEJ7	EnsemblPlants:EES03335
ProteinID:EES03335	ProteinID:EES03335.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004177	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774
GO:GO:0005829	GO:GO:0006508	GO:GO:0006518	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0008237	GO:GO:0008270	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	GO:GO:0019538
GO:GO:0046686	GO:GO:0046872	GO:GO:0061077	GO:GO:0070006	InterPro:IPR023358	PFAM:PF02127
PRINTS:PR00932	PANTHER:PTHR28570	InterPro:Peptidase_M18	InterPro:Peptidase_M18_dom2	EnsemblPlantsGene:SORBI_3003G233600	SUPFAM:SSF101821
SUPFAM:SSF53187	unigene:Sbi.6198	UniParc:UPI0001A850E5	RefSeq:XP_002458215.1	:	:

Description

hypothetical protein

Coordinates

chr3:-:57250053..57254620

Molecular Weight (calculated)

52438.6 Da

IEP (calculated)

6.582

GRAVY (calculated)

-0.187

Length

475 amino acids

Sequence
(BLAST)

001: MAAVAPVVSD LVDFLNVSPT AFHAVDEAKR RLKAAGFVQL SEREEWAGLE PGRKYFFTRN HSTIVAFAIG AKYVAGNGFH IIGAHTDSPC LKLKPVSKVT
101: KGGYLEVGVQ TYGGGLWYTW FDRDLTVAGR VITREKKDGE VSYAHKLVRV QEPIMRIPTL AIHLDRSLNS EGLKVNNQSH LVPVLATCIK NEMQKFVAEN
201: GPKQTSENVN TKHHPLLLQL IAKEANCEPD EICDFELQLC DTQPSAVAGA MKEFIFSGRL DNLCMSFCSL KALIDSSSVE HSLDHESGVR MVALFDHEEV
301: GSDSAQGAGS PAMLDALSRI TGSFNSSNSK LLEKAIQRSF LVSADMAHAL HPNYMDKHEE NHQPKLHGGL VIKHNANQRY ATNAVTAFIF REIAERHQLP
401: VQDFVVRNDM ACGSTIGPIL ASGVGIRTVD IGAPQLSMHS IREMCAVDDI SHAYEHFKAY YEEFTELDSK VKVDY

Best Arabidopsis Sequence Match ( AT5G60160.1 )
(BLAST)

001: MDKSSLVSDF LSFLNASPTA FHAVDESKRR LLKAGYEQIS ERDDWKLEAG KKYFFTRNYS TIVAFAIGHK YVAGNGFHII GAHTDSPCLK LKPVSKITKG
101: GCLEVGVQTY GGGLWYTWFD RDLTVAGRVI LKEEKAGSVS YSHRLVRIED PIMRIPTLAI HLDRNVNTEG FKPNTQTHLV PVLATAIKAE LNKTPAESGE
201: HDEGKKCAET SSKSKHHPLL MEIIANALGC KPEEICDFEL QACDTQPSIL AGAAKEFIFS GRLDNLCMSF CSLKALIDAT SSGSDLEDES GIRMVALFDH
301: EEVGSNSAQG AGSPVMIDAM SHITSCFSSD TKVLKKAIQK SLLVSADMAH ALHPNFMDKH EENHQPKMHG GLVIKHNANQ RYATNAVTSF VFREIAEKHN
401: LPVQDFVVRN DMGCGSTIGP ILASSVGIRT VDVGAPQLSM HSIREMCAAD DVKHSYEHFK AFFQEFTHLD AKLTIDV

Arabidopsis Description

AT5g60160/f15l12_20 [Source:UniProtKB/TrEMBL;Acc:Q9LST0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.