CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g007090.1.1	Tomato	cytosol, endoplasmic reticulum	81.54	25.92
KRG92030	Soybean	cytosol	93.08	22.45
VIT_13s0106g00700.t01	Wine grape	plastid	86.15	20.93
CDY44874	Canola	plastid	80.77	20.31
AT5G04710.1	Thale cress	plastid	81.54	20.15
CDX70207	Canola	plastid	80.77	19.89
Bra009435.1-P	Field mustard	plastid	80.0	19.73
HORVU2Hr1G060310.2	Barley	cytosol	36.92	19.28
TraesCS3A01G518600.1	Wheat	mitochondrion	74.62	18.76
TraesCS3D01G525700.1	Wheat	nucleus	74.62	18.76
TraesCS3B01G585600.1	Wheat	mitochondrion	74.62	18.73
HORVU3Hr1G113340.1	Barley	cytosol, plastid	74.62	18.34
GSMUA_Achr2P20310_001	Banana	plastid	76.92	18.21
Os01t0967900-02	Rice	mitochondrion	73.08	18.1
EES02126	Sorghum	mitochondrion	72.31	17.94
KRH54213	Soybean	cytosol	65.38	17.45
KRH63732	Soybean	cytosol	64.62	17.25
Zm00001d041989_P001	Maize	plastid	72.31	15.36
KRH34756	Soybean	extracellular, vacuole	0.77	0.54

Protein Annotations

MapMan:19.4.5.6.4	Gene3D:3.40.630.10	UniProt:A0A0R0I3R7	EMBL:ACUP02006626	EnsemblPlantsGene:GLYMA_10G203900	GO:GO:0003674
GO:GO:0003824	GO:GO:0004177	GO:GO:0005488	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0016787	GO:GO:0019538	EnsemblPlants:KRH34755	ProteinID:KRH34755	ProteinID:KRH34755.1
PFAM:PF02127	PANTHER:PTHR28570	PANTHER:PTHR28570:SF11	InterPro:Peptidase_M18	SUPFAM:SSF53187	UniParc:UPI00023CDD48

Description

hypothetical protein

Coordinates

chr10:-:43512879..43515798

Molecular Weight (calculated)

14482.6 Da

IEP (calculated)

8.873

GRAVY (calculated)

-0.183

Length

130 amino acids

Sequence
(BLAST)

001: MAHGVHPNFM DKHEELHRPK LQRVLVIKHN ANQRYATSGI TPFLFKEAGK IHNLPTQEFA VRNGMGCGST IGPILASGVG IRTVDCGIAQ LSMHSIREIC
101: AKEDIDIAYK HFKAFYQSFS SVDKMLTVDT

Best Arabidopsis Sequence Match ( AT5G60160.1 )
(BLAST)

001: MDKSSLVSDF LSFLNASPTA FHAVDESKRR LLKAGYEQIS ERDDWKLEAG KKYFFTRNYS TIVAFAIGHK YVAGNGFHII GAHTDSPCLK LKPVSKITKG
101: GCLEVGVQTY GGGLWYTWFD RDLTVAGRVI LKEEKAGSVS YSHRLVRIED PIMRIPTLAI HLDRNVNTEG FKPNTQTHLV PVLATAIKAE LNKTPAESGE
201: HDEGKKCAET SSKSKHHPLL MEIIANALGC KPEEICDFEL QACDTQPSIL AGAAKEFIFS GRLDNLCMSF CSLKALIDAT SSGSDLEDES GIRMVALFDH
301: EEVGSNSAQG AGSPVMIDAM SHITSCFSSD TKVLKKAIQK SLLVSADMAH ALHPNFMDKH EENHQPKMHG GLVIKHNANQ RYATNAVTSF VFREIAEKHN
401: LPVQDFVVRN DMGCGSTIGP ILASSVGIRT VDVGAPQLSM HSIREMCAAD DVKHSYEHFK AFFQEFTHLD AKLTIDV

Arabidopsis Description

AT5g60160/f15l12_20 [Source:UniProtKB/TrEMBL;Acc:Q9LST0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.