Factsheet for TraesCS3D01G525700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

nucleus: 26228564

msms PMID: 26228564 doi

E Bancel, T Bonnot, M Davanture, G Branlard, M Zivy, P Martre

Blaise Pascal University, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Avenue des Landais, F-63 170 Aubière, France., CNRS, PAPPSO, UMR 0320/8120 Génétique Quantitative et Évolution - Le Moulon, F-91190 Gif-sur-Yvette, France., INRA, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, 5 chemin de Beaulieu, F-63 039 Clermont-Ferrand, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G518600.1	Wheat	mitochondrion	99.03	99.03
TraesCS3B01G585600.1	Wheat	mitochondrion	97.87	97.68
HORVU2Hr1G060310.2	Barley	cytosol	42.75	88.75
HORVU3Hr1G113340.1	Barley	cytosol, plastid	89.94	87.9
Os01t0967900-02	Rice	mitochondrion	84.53	83.24
EES02126	Sorghum	mitochondrion	82.79	81.68
KRH34755	Soybean	cytosol	18.76	74.62
Solyc11g007090.1.1	Tomato	cytosol, endoplasmic reticulum	58.22	73.59
Zm00001d041989_P001	Maize	plastid	81.82	69.12
GSMUA_Achr2P20310_001	Banana	plastid	73.31	69.03
VIT_13s0106g00700.t01	Wine grape	plastid	71.37	68.97
CDY44874	Canola	plastid	68.47	68.47
CDX70207	Canola	plastid	68.86	67.42
AT5G04710.1	Thale cress	plastid	68.28	67.11
Bra009435.1-P	Field mustard	plastid	68.28	66.98
KRG92030	Soybean	cytosol	65.96	63.27
KRH34756	Soybean	extracellular, vacuole	21.28	59.46
TraesCS5D01G215200.2	Wheat	cytosol, golgi, unclear	53.38	58.47

Protein Annotations

MapMan:19.4.5.6.4	Gene3D:2.30.250.10	Gene3D:3.40.630.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004177
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009536	GO:GO:0009570	GO:GO:0016787
GO:GO:0019538	GO:GO:0070006	InterPro:IPR023358	PFAM:PF02127	PRINTS:PR00932	PANTHER:PTHR28570
PANTHER:PTHR28570:SF11	InterPro:Peptidase_M18	InterPro:Peptidase_M18_dom2	SUPFAM:SSF101821	SUPFAM:SSF53187	EnsemblPlantsGene:TraesCS3D01G525700
EnsemblPlants:TraesCS3D01G525700.1	TIGR:cd05658	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3D:+:604859312..604863010

Molecular Weight (calculated)

56891.3 Da

IEP (calculated)

7.443

GRAVY (calculated)

-0.203

Length

517 amino acids

Sequence
(BLAST)

001: MALLRLHLLR PPPAPLAAFS SPWRRALPTT RPAAPASRLL CSNHPAAPSS PSPSIVGGLL DYLNESWTQF HATAEAKRQL LAAGFELLSE NDDWNLQPGG
101: RYFFTRNMSC LVAFAVGEKY RVGNGFNIIA AHTDSPCLKL KPRSASIKSG HQMVGVQTYG GGLWHTWFDR DLTLAGRVIL KAPDGSFKHK LVKVNRPLIR
201: VPTLAIHLDR TVNSEGFKPN LESHLAPLLA TKCEETTVNF DDKKGSSSTK TVHHPLLLQV LSEEIGCGSD EIIGMELNVC DTQPSCLGGG KNEFIYSGRL
301: DNLASCYCAL KSLMDSSKMP EDLSNEKGIR MIALFDNEEV GSNSMQGAGA PTIFQAMRRI VDSLMHQSMG EGALERALTS SFLVSADMAH ALHPNYPDKH
401: EEYHRPELQK GLVIKHNANQ RYATSAVTAF LFKEIARIHN LPVQEFVVRN DMGCGSTIGP ILASGVGIRT VDCGIPQLSM HSVREMCGKE DIDTTYKHFK
501: AFFEMFSDID QKLNVDF

Best Arabidopsis Sequence Match ( AT5G04710.1 )
(BLAST)

001: MAAIARLPLT HSLPSIFNPS SFLSQSLSFP TYLHRSPFRS FSSVSPILCT SHRDSRSPGS DSNASIVGDL LDYLNESWTQ FHATAEAKRQ LLAAGFDLLS
101: ENEDWNLKPG GRYFFTRNMS CLVAFAVGEK YVPGNGFHAI AAHTDSPCLK LKPKSASSKS GYLMVNVQTY GGGLWHTWFD RDLSVAGRAI VRASDGSFVH
201: RLVKVKRPLL RVPTLAIHLD RTVNSDGFKP NLETQLVPLL ATKSDESSAE SKDKNVSSKD AHHPLLMQIL SDDLDCKVED IVSLELNICD TQPSCLGGAN
301: NEFIFSGRLD NLASSFCALR ALIDSCESSE NLSTEHDIRM IALFDNEEVG SDSCQGAGAP TMFQAMRRIV SSLGNKQVTE CTFDRAIRKS FLVSADMAHG
401: VHPNFADKHE ENHRPQLHKG LVIKHNANQR YATSGITSFL FKEVAKLHDL PIQEFVVRND MGCGSTIGPI LASGVGIRTV DCGIAQLSMH SVREICGTDD
501: IDIAYRHFKA FYRSFSSVDK KLVVDD

Arabidopsis Description

Aspartyl aminopeptidase [Source:UniProtKB/TrEMBL;Acc:Q9LZ26]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.