Factsheet for Solyc11g007090.1.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

endoplasmic reticulum: 29145071

msms PMID: 29145071 doi

P Ibort, H Imai, M Uemura, R Aroca

Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: pablo.ibort@eez.csic.es., Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: raroca@eez.csic.es., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: u0414004@iwate-u.ac.jp., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: uemura@iwate-u.ac.jp.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34755	Soybean	cytosol	25.92	81.54
CDY44874	Canola	plastid	80.68	63.83
HORVU2Hr1G060310.2	Barley	cytosol	38.63	63.45
VIT_13s0106g00700.t01	Wine grape	plastid	82.89	63.36
CDX70207	Canola	plastid	81.17	62.88
Bra009435.1-P	Field mustard	plastid	80.68	62.62
AT5G04710.1	Thale cress	plastid	80.44	62.55
KRH34756	Soybean	extracellular, vacuole	28.12	62.16
Os01t0967900-02	Rice	mitochondrion	77.02	60.0
KRG92030	Soybean	cytosol	77.26	58.63
EES02126	Sorghum	mitochondrion	75.06	58.59
TraesCS3D01G525700.1	Wheat	nucleus	73.59	58.22
TraesCS3A01G518600.1	Wheat	mitochondrion	73.11	57.83
TraesCS3B01G585600.1	Wheat	mitochondrion	73.11	57.72
GSMUA_Achr2P20310_001	Banana	plastid	76.53	57.01
HORVU3Hr1G113340.1	Barley	cytosol, plastid	73.35	56.71
Zm00001d041989_P001	Maize	plastid	74.82	50.0
Solyc03g111180.2.1	Tomato	extracellular, nucleus	58.68	49.79

Protein Annotations

MapMan:19.4.5.6.4	Gene3D:2.30.250.10	Gene3D:3.40.630.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004177
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006508
GO:GO:0006518	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008237	GO:GO:0008270
GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0046872
GO:GO:0070006	InterPro:IPR023358	UniProt:K4D4X0	MEROPS:M18.A02	PFAM:PF02127	PRINTS:PR00932
PANTHER:PTHR28570	PANTHER:PTHR28570:SF11	InterPro:Peptidase_M18	InterPro:Peptidase_M18_dom2	SUPFAM:SSF101821	SUPFAM:SSF53187
EnsemblPlantsGene:Solyc11g007090.1	EnsemblPlants:Solyc11g007090.1.1	UniParc:UPI000276A0EC	:	:	:

Description

No Description!

Coordinates

chr11:+:1557511..1565120

Molecular Weight (calculated)

44911.5 Da

IEP (calculated)

6.818

GRAVY (calculated)

-0.149

Length

409 amino acids

Sequence
(BLAST)

001: MSSLVAFAIG KKYSIGDGFH VIAAHTDSPC LKLKPKSAST KSGYLMVNVQ TYGGGLWHTW FDRDLSVAGR VILRDDDGSF LHRLVKITRP LLRVPTLAIH
101: LNRTVNQDGF KPNLETHLIP LLATKTENAT ADSTEKSNVS SSKDVHHQLL LKILSDELSC KIEDIVSVEL NICDTQPSCL GGANNEFIFS GRLDNLASSF
201: CGLRALVDSC ALPEDLSNEN SIRMIALFDN EEVGSDSCQG AGAPTMFEAM RRITDCLSHQ SAGETDFARA IRHSFLVSAD MAHGVHPNFV DKHEEHHRPE
301: LQKGLVIKHN ANQRYATSGI TSFLFKEVAR LHSLPTQDFV VRNDMGCGST IGPILAAGVG IRTVDCGIAQ LSMHSVREIC GKEDVDIAYK HFKAFYQSFS
401: SIDRKLNVD

Best Arabidopsis Sequence Match ( AT5G04710.1 )
(BLAST)

001: MAAIARLPLT HSLPSIFNPS SFLSQSLSFP TYLHRSPFRS FSSVSPILCT SHRDSRSPGS DSNASIVGDL LDYLNESWTQ FHATAEAKRQ LLAAGFDLLS
101: ENEDWNLKPG GRYFFTRNMS CLVAFAVGEK YVPGNGFHAI AAHTDSPCLK LKPKSASSKS GYLMVNVQTY GGGLWHTWFD RDLSVAGRAI VRASDGSFVH
201: RLVKVKRPLL RVPTLAIHLD RTVNSDGFKP NLETQLVPLL ATKSDESSAE SKDKNVSSKD AHHPLLMQIL SDDLDCKVED IVSLELNICD TQPSCLGGAN
301: NEFIFSGRLD NLASSFCALR ALIDSCESSE NLSTEHDIRM IALFDNEEVG SDSCQGAGAP TMFQAMRRIV SSLGNKQVTE CTFDRAIRKS FLVSADMAHG
401: VHPNFADKHE ENHRPQLHKG LVIKHNANQR YATSGITSFL FKEVAKLHDL PIQEFVVRND MGCGSTIGPI LASGVGIRTV DCGIAQLSMH SVREICGTDD
501: IDIAYRHFKA FYRSFSSVDK KLVVDD

Arabidopsis Description

Aspartyl aminopeptidase [Source:UniProtKB/TrEMBL;Acc:Q9LZ26]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.