Factsheet for Zm00001d041989_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

plastid: 22065420
plastid: 23198870

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02126	Sorghum	mitochondrion	83.33	97.33
Os01t0967900-02	Rice	mitochondrion	71.73	83.62
TraesCS3D01G525700.1	Wheat	nucleus	69.12	81.82
TraesCS3A01G518600.1	Wheat	mitochondrion	68.79	81.43
TraesCS3B01G585600.1	Wheat	mitochondrion	68.3	80.69
HORVU2Hr1G060310.2	Barley	cytosol	31.86	78.31
HORVU3Hr1G113340.1	Barley	cytosol, plastid	67.16	77.69
Solyc11g007090.1.1	Tomato	cytosol, endoplasmic reticulum	50.0	74.82
KRH34755	Soybean	cytosol	15.36	72.31
VIT_13s0106g00700.t01	Wine grape	plastid	59.97	68.6
CDY44874	Canola	plastid	56.37	66.73
AT5G04710.1	Thale cress	plastid	57.35	66.73
GSMUA_Achr2P20310_001	Banana	plastid	59.64	66.48
Bra009435.1-P	Field mustard	plastid	56.86	66.03
CDX70207	Canola	plastid	56.86	65.91
KRG92030	Soybean	cytosol	55.88	63.45
KRH34756	Soybean	extracellular, vacuole	18.95	62.7
Zm00001d044102_P002	Maize	cytosol	45.1	57.98

Protein Annotations

MapMan:19.4.5.6.4	Gene3D:2.30.250.10	Gene3D:3.40.630.10	UniProt:A0A1D6N0E9	GO:GO:0003674	GO:GO:0003824
GO:GO:0004177	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009536	GO:GO:0009570
GO:GO:0016787	GO:GO:0019538	GO:GO:0070006	InterPro:IPR023358	ProteinID:ONM34263.1	PFAM:PF02127
PRINTS:PR00932	PFscan:PS51257	PANTHER:PTHR28570	PANTHER:PTHR28570:SF11	InterPro:Peptidase_M18	InterPro:Peptidase_M18_dom2
SUPFAM:SSF101821	SUPFAM:SSF53187	UniParc:UPI000844299D	EnsemblPlantsGene:Zm00001d041989	EnsemblPlants:Zm00001d041989_P001	EnsemblPlants:Zm00001d041989_T001
SEG:seg	:	:	:	:	:

Description

Zn-dependent exopeptidases superfamily protein

Coordinates

chr3:-:146714375..146719230

Molecular Weight (calculated)

67701.3 Da

IEP (calculated)

7.739

GRAVY (calculated)

-0.201

Length

612 amino acids

Sequence
(BLAST)

001: MALLRLHLPR PLLSSRRSPA LPSALSASAT SCLWRGRLPA SRLLCSSHPA LAPDASSAAP PSIVAGLLDY LNESWTQFHA TGSSAGRSPS SPPRRPHARP
101: MFGDMTPCYR ANEFRSRHAL TSFSVLPAEA KRQLLDAGFK LLSESDDWDL QPGGRYFFTR NMSCLVAFAI GEKSVTHLAL SLYHYHIVSH LSIACHSICM
201: NMISAHIDRH VTDCRYRVGN GFNIIAAHTD SPCLKLKPRS ATIKSGHQMV NVQTYGSGLW HTWFDRDLTL AGRLILKATD GSFKHELVKL TRPLIRVPTL
301: AIHLNRTVNT DGFKPNLETH LVPLLATKHE DTPTNSDEKS SNSTKVTHHP LLLQILSEEI GCDPDEIIGM ELNVCDTQPS CLGGGNNEFI YSGRLDNLAS
401: CYCALRSLMD SSKMAEQLSN EKAIRMVAMF DNEEVGSDSM QGAGAPTMFQ AMRRIIDSLM HQSMGEGALE RAIHSSFLVS ADMAHALHPN YAEKHEECHR
501: PELQKGLVIK HNANQRYATS AVTAFLFKEI ARIHNLPVQE FVVRNDMGCG STIGPILASG VGIRTVDCGI PQLSMHSVRE MCGKEDVDTT YRHFKAFFEM
601: FSDIDRKLNV DF

Best Arabidopsis Sequence Match ( AT5G04710.1 )
(BLAST)

001: MAAIARLPLT HSLPSIFNPS SFLSQSLSFP TYLHRSPFRS FSSVSPILCT SHRDSRSPGS DSNASIVGDL LDYLNESWTQ FHATAEAKRQ LLAAGFDLLS
101: ENEDWNLKPG GRYFFTRNMS CLVAFAVGEK YVPGNGFHAI AAHTDSPCLK LKPKSASSKS GYLMVNVQTY GGGLWHTWFD RDLSVAGRAI VRASDGSFVH
201: RLVKVKRPLL RVPTLAIHLD RTVNSDGFKP NLETQLVPLL ATKSDESSAE SKDKNVSSKD AHHPLLMQIL SDDLDCKVED IVSLELNICD TQPSCLGGAN
301: NEFIFSGRLD NLASSFCALR ALIDSCESSE NLSTEHDIRM IALFDNEEVG SDSCQGAGAP TMFQAMRRIV SSLGNKQVTE CTFDRAIRKS FLVSADMAHG
401: VHPNFADKHE ENHRPQLHKG LVIKHNANQR YATSGITSFL FKEVAKLHDL PIQEFVVRND MGCGSTIGPI LASGVGIRTV DCGIAQLSMH SVREICGTDD
501: IDIAYRHFKA FYRSFSSVDK KLVVDD

Arabidopsis Description

Aspartyl aminopeptidase [Source:UniProtKB/TrEMBL;Acc:Q9LZ26]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.