CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:

nucleus 1
golgi 1
cytosol 1
plasma membrane 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	extracellular	40.14	68.64
GSMUA_Achr10P...	Banana	cytosol	62.28	42.76
KRH52219	Soybean	cytosol, plasma membrane, plastid	92.04	30.47
KRH61539	Soybean	cytosol	94.81	30.44
PGSC0003DMT400021155	Potato	cytosol	86.51	28.57
Solyc08g062630.2.1	Tomato	nucleus, plastid, unclear	85.47	28.23
CDX68938	Canola	cytosol, plasma membrane, plastid	84.78	28.06
AT4G33090.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	85.12	27.99
CDX75323	Canola	cytosol, plasma membrane, plastid	84.43	27.95
Bra011412.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	84.08	27.84
CDY45028	Canola	cytosol, plasma membrane, plastid	78.89	27.31
Bra034547.1-P	Field mustard	cytosol, plasma membrane, plastid	82.01	27.21
CDY28282	Canola	cytosol, plasma membrane, plastid	82.35	27.2
KRH39126	Soybean	cytosol, extracellular, plastid	21.11	25.0
VIT_17s0000g09920.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	15.22	12.32
KRG93029	Soybean	nucleus	24.57	11.64
KRH47528	Soybean	cytosol	15.22	8.61
KRH52220	Soybean	mitochondrion	3.81	5.14
GSMUA_Achr10P...	Banana	mitochondrion	7.96	4.65
KRH06096	Soybean	extracellular, golgi	1.04	4.48
KRH61543	Soybean	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.390.60	MapMan:19.4.5.6.5	Gene3D:2.60.40.1730	EMBL:ACUP02010156	EnsemblPlantsGene:GLYMA_16G140100	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008237	GO:GO:0008270	GO:GO:0009056
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0042277	GO:GO:0043171	GO:GO:0070006
UniProt:K7MHA2	EnsemblPlants:KRH08282	ProteinID:KRH08282	ProteinID:KRH08282.1	MEROPS:M01.A25	InterPro:M1_APN-typ
PFAM:PF01433	PRINTS:PR00756	PANTHER:PTHR11533	PANTHER:PTHR11533:SF183	InterPro:Peptidase_M1	InterPro:Peptidase_M1_N
SUPFAM:SSF55486	SUPFAM:SSF63737	UniParc:UPI0002969A09	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr16:+:29739111..29740016

Molecular Weight (calculated)

32776.0 Da

IEP (calculated)

4.621

GRAVY (calculated)

0.037

Length

289 amino acids

Sequence
(BLAST)

001: MAVTQFEPTD ARRCFPCWDE PACKDTFKIT LDLPSELVAL SNMPIVEEII DGDLKIVSYQ ESPIMSTYLV AVVVGLFDYV EDHTSDGVKV RVYCQVVVKT
101: LELYKGYFAT PYSLPKLDMI AIPDFAAGAI ENYGLVTYRE TALLYGDQHS AAANKQRVAT VVAHELAHHW FGNLVAMEWW THLWLNEGFA TWVSYLATDS
201: CFLEWKIWSK FLHESTEGLS LDGLAESHPI EVEINHACEI DEIFDAISYR KGAYVIRMLQ SYLGVECFQR SLASYIKRHA CSNAKTEDL

Best Arabidopsis Sequence Match ( AT5G13520.1 )
(BLAST)

001: MAPIDPHSFT DSSHPLTTHV ALSLYLDFNT SIIHGSALLT LSSAFSGELS LDTRCISIAM VLDPLTLEPI PYSVSTTPDR IRGTEVVVVL SGQSSLLIVY
101: STSPSASALQ WLSPLQTFSK LHPYVYTQCQ AIHARSIFPC QDTPAARIRY DVVMNIPNSL SAVMSARHVR RRLAVPEEAK HLEAGSLGSS LWCGEDRVVE
201: EFAMEQPIPP YLFAFAVGEL GFREVGPRTR VYTESAAIEV LDAAALEFAG TEDMIKQGEK LFGDYEWERF DLLVLPPSFP YGGMENPRMV FLTPTVIKGD
301: ATGAQVVAHE LAHSWTGNLI TNINNEHFWL NEGFTTYAER RIVEVVQGAD IATLNIGIGW RGLTDEMERF KDNLECTKLW NKQEGVDPDD VYSQVPYEKG
401: FQFVLRIERQ IGRTAFDEFL KKYIATFKFK SIDTNTFLEF LKANIPGIEK EINLQLWTEG VGIPEDAYEP VSTIYTKIIS LAKEFKEGKM PSEDDVAEWN
501: GQEWELYLEN LPKSCEPSQV MALDKRYRLA ESKDYEVKVS FLQLAVTSKC REYHGEVKKT LKEVGRMKYL RPLFTALAQS GGTEEKQLAK QVFAEARETY
601: HPIAQGVVES ILSKYI

Arabidopsis Description

LKHA4Leukotriene A-4 hydrolase homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9FY49]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.