Factsheet for PGSC0003DMT400021155

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 2
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g062630.2.1	Tomato	nucleus, plastid, unclear	96.46	96.46
KRH08282	Soybean	cytosol, endoplasmic reticulum, plasma membrane	28.57	86.51
GSMUA_Achr10P...	Banana	extracellular	15.09	78.11
VIT_04s0008g01430.t01	Wine grape	cytosol, plasma membrane, plastid	77.94	77.5
KRH52219	Soybean	cytosol, plasma membrane, plastid	75.43	75.6
CDX75323	Canola	cytosol, plasma membrane, plastid	74.4	74.57
Bra011412.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	74.29	74.46
AT4G33090.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	74.74	74.4
CDX68938	Canola	cytosol, plasma membrane, plastid	74.06	74.23
KRH61539	Soybean	cytosol	75.66	73.56
Bra034547.1-P	Field mustard	cytosol, plasma membrane, plastid	71.89	72.22
CDY28282	Canola	cytosol, plasma membrane, plastid	72.11	72.11
CDY45028	Canola	cytosol, plasma membrane, plastid	68.46	71.74
GSMUA_Achr10P...	Banana	cytosol	32.34	67.22
GSMUA_Achr10P...	Banana	mitochondrion	36.0	63.64
KRH39126	Soybean	cytosol, extracellular, plastid	13.14	47.13
PGSC0003DMT400074587	Potato	cytosol	11.31	16.18

Protein Annotations

Gene3D:1.10.390.60	Gene3D:1.25.50.20	EntrezGene:102600594	MapMan:19.4.5.6.5	Gene3D:2.60.40.1730	Gene3D:2.60.40.1910
ncoils:Coil	InterPro:ERAP1-like_C_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004177	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005886
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008237	GO:GO:0008270
GO:GO:0010013	GO:GO:0016020	GO:GO:0016787	GO:GO:0019538	GO:GO:0046872	UniProt:M1AEP7
InterPro:M1_APN-typ	PFAM:PF01433	PFAM:PF11838	EnsemblPlantsGene:PGSC0003DMG400008191	PGSC:PGSC0003DMG400008191	EnsemblPlants:PGSC0003DMT400021155
PRINTS:PR00756	PANTHER:PTHR11533	PANTHER:PTHR11533:SF183	InterPro:Peptidase_M1	InterPro:Peptidase_M1_N	SUPFAM:SSF55486
SUPFAM:SSF63737	UniParc:UPI000294F08C	RefSeq:XP_006351601.1	SEG:seg	:	:

Description

Puromycin-sensitive aminopeptidase [Source:PGSC_GENE;Acc:PGSC0003DMG400008191]

Coordinates

chr8:+:34743961..34752054

Molecular Weight (calculated)

99330.7 Da

IEP (calculated)

5.676

GRAVY (calculated)

-0.185

Length

875 amino acids

Sequence
(BLAST)

001: MEKNYDQFKG QSRLPKFAVP KRYDLKLKPD LVTCKFVGAV DISLDVISPT KFIVLNAAEL SVDRKAVHFK SSNKVFEALE VGLIEEDEIL VVEFGESLPV
101: GLGVLSMAFE GTLNDRMKGF YRSTYEHNGE KRNMAVTQFE PADARRCFPC WDEPACKATF KITLEVPSEL VALSNMPVEE EKVTGNLKTV HYQESPIMST
201: YLVAIVVGLF DYVEDHTSDG IPVRVYCQVG KANQGNFALH VAVKTLPLFK EYFAAPYSLP KLDMIAIPDF AAGAMENYGL VTYRETALLY DDKHSAAANK
301: QRVATVVAHE LAHQWFGNLV TMEWWTHLWL NEGFATWVSY LATDSLFPEW KIWTQFLEEA TEGLRLDGLA ESHPIEVDIN HAGEIDEIFD AISYRKGASV
401: IRMLQSYLGP ESFQRALASY IKRYACSNAK TEDLWSVLQE ESGEPVNKLM NSWTKQQGYP VVSVKINDQK LECEQTQFLL SGSHGDGQWI VPLTLCCGSY
501: KARKSFLMQE KSEALDVKDL LCSSSSKGNL WIKVNVEQTG FYRVKYDDEL SARLRYAIES KVLSTNDKYG ILDDSYALSM ACHQSLSSLL ALMASFREEL
601: DYTVLSNLIS ISYKVSRIVA EAVPDLQNHI KLFFINLFQF SAERLGWDPK EGESHLDAML RGELLNALAA FGHDETINEA IRRFHIFLDD RNTAVLPPDL
701: RKAVYVAVMQ RVNKSDRSGF EALLRIYRET DLSQEKTRIL GALASCKDPE IILEILNFLL CSEVRSQDCV FGLAVSFEGR ETAWKWLKEK WDHIHKTFGS
801: GFLLTRFISA TVSPFSSYEK AKEVEEFFAS RTKPYIARTL KQSIERVHIN ANWVQSIQKE KNLSEAVTEL AYRKY

Best Arabidopsis Sequence Match ( AT4G33090.1 )
(BLAST)

001: MDQFKGEPRL PKFAVPKRYD LRLNPDLIAC TFTGTVAIDL DIVADTRFIV LNAADLSVND ASVSFTPPSS SKALAAPKVV LFEEDEILVL EFGEILPHGV
101: GVLKLGFNGV LNDKMKGFYR STYEHNGEKK NMAVTQFEPA DARRCFPCWD EPACKATFKI TLEVPTDLVA LSNMPIMEEK VNGNLKIVSY QESPIMSTYL
201: VAIVVGLFDY VEDHTSDGIK VRVYCQVGKA DQGKFALHVG AKTLDLFKEY FAVPYPLPKM DMIAIPDFAA GAMENYGLVT YRETALLYDE QHSAASNKQR
301: VATVVAHELA HQWFGNLVTM EWWTHLWLNE GFATWVSYLA TDSLFPEWKI WTQFLDESTE GLRLDGLEES HPIEVEVNHA AEIDEIFDAI SYRKGASVIR
401: MLQSYLGAEV FQKSLAAYIK NHAYSNAKTE DLWAALEAGS GEPVNKLMSS WTKQKGYPVV SAKIKDGKLE LEQSRFLSSG SPGEGQWIVP VTLCCGSYEK
501: RKNFLLESKS GAYDLKELLG CSIADGSDKI NGTCSWIKIN VDQAGFYRVK YDDSLAAGLR NATESQSLTS IDRYGILDDS FALTMARQQS LASLLTLCSA
601: YKKELDYTVL SNLIAISYKV VKIGADANQE LMSGIKHFFI GVFQFAAGKL GWDPKQGESH LDAMLRGEVL TALAVFGHDE TLKEAVRRFD AFLADRNTPL
701: LPPDIRRAAY VAVMQRANKS DKSGYESLLR VYRETDLSQE KTRILGSLAS CPDPTIVQDV LNFVLSDEVR NQDALYGLSG VSWEGREVAW KWLQEKWEYI
801: GNTWGSGFLI TRFISAVVSP FASFEKAKEV EEFFATRSKP SMARTLKQSI ERVHINANWV ESIKKEDNLT QLVAQLSSN

Arabidopsis Description

APM1Aminopeptidase [Source:UniProtKB/TrEMBL;Acc:A0A178UWR6]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.