Factsheet for Bra011412.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 2
endoplasmic reticulum 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75323	Canola	cytosol, plasma membrane, plastid	99.77	99.77
CDX68938	Canola	cytosol, plasma membrane, plastid	98.63	98.63
AT4G33090.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	92.21	91.58
Bra034547.1-P	Field mustard	cytosol, plasma membrane, plastid	90.03	90.24
KRH08282	Soybean	cytosol, endoplasmic reticulum, plasma membrane	27.84	84.08
GSMUA_Achr10P...	Banana	extracellular	15.12	78.11
VIT_04s0008g01430.t01	Wine grape	cytosol, plasma membrane, plastid	76.17	75.57
PGSC0003DMT400021155	Potato	cytosol	74.46	74.29
Solyc08g062630.2.1	Tomato	nucleus, plastid, unclear	73.65	73.49
KRH52219	Soybean	cytosol, plasma membrane, plastid	73.42	73.42
KRH61539	Soybean	cytosol	74.23	72.0
GSMUA_Achr10P...	Banana	cytosol	32.53	67.46
GSMUA_Achr10P...	Banana	mitochondrion	34.14	60.2
KRH39126	Soybean	cytosol, extracellular, plastid	13.29	47.54
Bra008823.1-P	Field mustard	cytosol	11.34	16.12
Bra023419.1-P	Field mustard	cytosol	10.88	15.52

Protein Annotations

Gene3D:1.10.390.60	Gene3D:1.25.50.20	MapMan:19.4.5.6.5	Gene3D:2.60.40.1730	Gene3D:2.60.40.1910	EnsemblPlantsGene:Bra011412
EnsemblPlants:Bra011412.1	EnsemblPlants:Bra011412.1-P	InterPro:ERAP1-like_C_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004177
GO:GO:0005488	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008237
GO:GO:0008270	GO:GO:0016787	GO:GO:0019538	GO:GO:0046872	MEROPS:M01.A25	InterPro:M1_APN-typ
UniProt:M4D4K8	PFAM:PF01433	PFAM:PF11838	PRINTS:PR00756	PANTHER:PTHR11533	PANTHER:PTHR11533:SF183
InterPro:Peptidase_M1	InterPro:Peptidase_M1_N	SUPFAM:SSF55486	SUPFAM:SSF63737	UniParc:UPI0002545EA3	:

Description

AT4G33090 (E=0.0) APM1, ATAPM1 | APM1 (AMINOPEPTIDASE M1); aminopeptidase

Coordinates

chrA01:+:2276800..2281142

Molecular Weight (calculated)

97601.3 Da

IEP (calculated)

5.213

GRAVY (calculated)

-0.133

Length

873 amino acids

Sequence
(BLAST)

001: MDQFKGQPRL PKFAVPKRYD LRLTPDLVAC TFTGTVAIDL DVVADTRFIV LNAADLSFND ASVSFTPHNS SQALAAPKVS LFEEDEILVL EFAENLPHGV
101: GVLQMAFSGI LSDKMKGFYK STYEHNGEKK NMAVTQFEPA DARRCFPCWD EPACKATFKI TLEVPSDLVA LSHMPVVDEK VNGNGKVVSY QESPIMSTYL
201: VAIVVGLFDY VEDHTSDGIK VRVYCQVGKA DQGKFALHVG AKTLDLFKEY FAVPYPLPKI DMIAIPDFAA GAMENYGLVT YRETALLYDE QHSAASNKQR
301: VATVVAHELA HQWFGNLVTM EWWTHLWLNE GFATWVSYLA TDSLFPEWKI WTQFLDESTE GLRLDGLEES HPIEVEVNHA SEIDEIFDAI SYRKGASVIR
401: MLQSYLGAEV FQKSLAAYVK RHAYSNAKTE DLWTALEEGS GEPVNKLMSS WTKQMGYPVV SAKLKDGKLE LEQSRFLSSG SPGEGQWIVP VTLCCGSYDV
501: RKNFLLESKS GAYDIKELLG CSVGDGTCSW IKINVDQAGF YRVKYDDTLA AGLRKATESQ SLTAIDRYGI LDDSFALCMA RQQSLASLLT LISAYKKELD
601: YTVLSNLIVI SYKVVKIAAD VSLELTSGIK QFFIGVFQLA AGRLGWDPKQ GESHLDAMLR GEVLTALAAF GHDETLKEAI RRFDAFLADR NTSLLPPDLR
701: RAAYVAVMQR ANKSDKSGYE SLLKVYRETD LSQEKTRILG SLACCPDPSI VQDVLNFVLS DEVRNQDAVY GLSGVSWEGR EVAWKWLQEK WEYIEKTWGS
801: GFLLTRFISA VVSPFASFEK AKEVQEYFIT RSKPSMARTL KQSIEKVHIN ANWVESIKKE DNLTHLVAQL SSN

Best Arabidopsis Sequence Match ( AT4G33090.1 )
(BLAST)

001: MDQFKGEPRL PKFAVPKRYD LRLNPDLIAC TFTGTVAIDL DIVADTRFIV LNAADLSVND ASVSFTPPSS SKALAAPKVV LFEEDEILVL EFGEILPHGV
101: GVLKLGFNGV LNDKMKGFYR STYEHNGEKK NMAVTQFEPA DARRCFPCWD EPACKATFKI TLEVPTDLVA LSNMPIMEEK VNGNLKIVSY QESPIMSTYL
201: VAIVVGLFDY VEDHTSDGIK VRVYCQVGKA DQGKFALHVG AKTLDLFKEY FAVPYPLPKM DMIAIPDFAA GAMENYGLVT YRETALLYDE QHSAASNKQR
301: VATVVAHELA HQWFGNLVTM EWWTHLWLNE GFATWVSYLA TDSLFPEWKI WTQFLDESTE GLRLDGLEES HPIEVEVNHA AEIDEIFDAI SYRKGASVIR
401: MLQSYLGAEV FQKSLAAYIK NHAYSNAKTE DLWAALEAGS GEPVNKLMSS WTKQKGYPVV SAKIKDGKLE LEQSRFLSSG SPGEGQWIVP VTLCCGSYEK
501: RKNFLLESKS GAYDLKELLG CSIADGSDKI NGTCSWIKIN VDQAGFYRVK YDDSLAAGLR NATESQSLTS IDRYGILDDS FALTMARQQS LASLLTLCSA
601: YKKELDYTVL SNLIAISYKV VKIGADANQE LMSGIKHFFI GVFQFAAGKL GWDPKQGESH LDAMLRGEVL TALAVFGHDE TLKEAVRRFD AFLADRNTPL
701: LPPDIRRAAY VAVMQRANKS DKSGYESLLR VYRETDLSQE KTRILGSLAS CPDPTIVQDV LNFVLSDEVR NQDALYGLSG VSWEGREVAW KWLQEKWEYI
801: GNTWGSGFLI TRFISAVVSP FASFEKAKEV EEFFATRSKP SMARTLKQSI ERVHINANWV ESIKKEDNLT QLVAQLSSN

Arabidopsis Description

APM1Aminopeptidase [Source:UniProtKB/TrEMBL;Acc:A0A178UWR6]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.