Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75323 | Canola | cytosol, plasma membrane, plastid | 98.85 | 98.85 |
| Bra011412.1-P | Field mustard | cytosol, endoplasmic reticulum, plasma membrane | 98.63 | 98.63 |
| AT4G33090.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 92.1 | 91.47 |
| CDY45028 | Canola | cytosol, plasma membrane, plastid | 85.68 | 89.58 |
| CDY28282 | Canola | cytosol, plasma membrane, plastid | 89.46 | 89.26 |
| KRH08282 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 28.06 | 84.78 |
| GSMUA_Achr10P... | Banana | extracellular | 15.12 | 78.11 |
| VIT_04s0008g01430.t01 | Wine grape | cytosol, plasma membrane, plastid | 76.06 | 75.45 |
| PGSC0003DMT400021155 | Potato | cytosol | 74.23 | 74.06 |
| Solyc08g062630.2.1 | Tomato | nucleus, plastid, unclear | 73.42 | 73.26 |
| KRH52219 | Soybean | cytosol, plasma membrane, plastid | 73.2 | 73.2 |
| KRH61539 | Soybean | cytosol | 74.23 | 72.0 |
| GSMUA_Achr10P... | Banana | cytosol | 32.88 | 68.17 |
| GSMUA_Achr10P... | Banana | mitochondrion | 33.91 | 59.8 |
| KRH39126 | Soybean | cytosol, extracellular, plastid | 13.4 | 47.95 |
| CDY65639 | Canola | cytosol | 2.75 | 18.18 |
| CDY09805 | Canola | cytosol | 11.34 | 16.12 |
| CDX69635 | Canola | cytosol | 11.34 | 16.12 |
| CDX91114 | Canola | cytosol | 6.3 | 15.94 |
| CDX85643 | Canola | cytosol | 10.88 | 15.52 |
Protein Annotations
| Gene3D:1.10.390.60 | Gene3D:1.25.50.20 | MapMan:19.4.5.6.5 | Gene3D:2.60.40.1730 | Gene3D:2.60.40.1910 | GO:A0A078C1G4 |
| EnsemblPlants:CDX68938 | ProteinID:CDX68938 | ProteinID:CDX68938.1 | InterPro:ERAP1-like_C_dom | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008237 | GO:GO:0008270 |
| GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00130682001 | MEROPS:M01.A25 | InterPro:M1_APN-typ | PFAM:PF01433 |
| PFAM:PF11838 | PRINTS:PR00756 | PANTHER:PTHR11533 | PANTHER:PTHR11533:SF183 | InterPro:Peptidase_M1 | InterPro:Peptidase_M1_N |
| SUPFAM:SSF55486 | SUPFAM:SSF63737 | UniParc:UPI0004EE807C | SEG:seg | : | : |
Description
BnaC01g05150D
Coordinates
chrLK031789:-:2122734..2127252
Molecular Weight (calculated)
97682.4 Da
IEP (calculated)
5.163
GRAVY (calculated)
-0.136
Length
873 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQFKGQPRL PKFAVPKRYD LRLTPDLVAC TFTGTVAIDL DVVADTRFIV LNAADLAFND ASVSFTPHNS SQALAAPKVS LFEEDEILVL EFAENLPHGV
101: GVLQMAFDGI LSDKMKGFYK STYEHNGEKK NMAVTQFEPA DARRCFPCWD EPACKATFKI TLEVPSDLVA LSNMPVVEEK VNGSVKVVSY QESPIMSTYL
201: VAIVVGLFDY VEDHTSDGIK VRVYCQVGKA DQGKFALHVG AKTLDLFKEY FAVPYPLPKI DMIAIPDFAA GAMENYGLVT YRETALLYDE QHSAASNKQR
301: VATVVAHELA HQWFGNLVTM EWWTHLWLNE GFATWVSYLA TDSLFPEWKI WTQFLDESTE GLRLDGLEES HPIEVEVNHA SEIDEIFDAI SYRKGASVIR
401: MLQSYLGAEV FQKSLAAYVK RHAYSNAKTE DLWTALEEGS GEPVNKLMSS WTKQMGYPVV SAKLKDGKLE LEQSRFLSSG SPGEGQWIVP VTLCCGSYDV
501: RKNFLLESKS GAYDIKELLG CSIGDGTCSW IKINVDQAGF YRVKYDDSLA AGLRKATESQ RLTAIDRYGI LDDSFALCMA RQQSLASLLT LISAYKKELD
601: YTVLSNLIVI SYKVVKIAAD VSSELTSGIK QFFIGVFQLA AGRLGWDPKQ GESHLDAMLR GEVLTALTAF GHDETLKEAI RRFDAFLADR NTSLLPPDLR
701: RAAYVAVMQR ANKSDKSGYE SLLKVYRETD LSQEKTRILG SLACCPDPSI VQDVLNFVLS DEVRNQDAVY GLSGVSWEGR EVAWKWLQEK WEYIEKTWGS
801: GFLLTRFISA VVSSFASFEK AKEVQEYFIT RSKPSMARTL KQSIEKVHIN ANWVESIKKE DNLTHLVAQL SSN
101: GVLQMAFDGI LSDKMKGFYK STYEHNGEKK NMAVTQFEPA DARRCFPCWD EPACKATFKI TLEVPSDLVA LSNMPVVEEK VNGSVKVVSY QESPIMSTYL
201: VAIVVGLFDY VEDHTSDGIK VRVYCQVGKA DQGKFALHVG AKTLDLFKEY FAVPYPLPKI DMIAIPDFAA GAMENYGLVT YRETALLYDE QHSAASNKQR
301: VATVVAHELA HQWFGNLVTM EWWTHLWLNE GFATWVSYLA TDSLFPEWKI WTQFLDESTE GLRLDGLEES HPIEVEVNHA SEIDEIFDAI SYRKGASVIR
401: MLQSYLGAEV FQKSLAAYVK RHAYSNAKTE DLWTALEEGS GEPVNKLMSS WTKQMGYPVV SAKLKDGKLE LEQSRFLSSG SPGEGQWIVP VTLCCGSYDV
501: RKNFLLESKS GAYDIKELLG CSIGDGTCSW IKINVDQAGF YRVKYDDSLA AGLRKATESQ RLTAIDRYGI LDDSFALCMA RQQSLASLLT LISAYKKELD
601: YTVLSNLIVI SYKVVKIAAD VSSELTSGIK QFFIGVFQLA AGRLGWDPKQ GESHLDAMLR GEVLTALTAF GHDETLKEAI RRFDAFLADR NTSLLPPDLR
701: RAAYVAVMQR ANKSDKSGYE SLLKVYRETD LSQEKTRILG SLACCPDPSI VQDVLNFVLS DEVRNQDAVY GLSGVSWEGR EVAWKWLQEK WEYIEKTWGS
801: GFLLTRFISA VVSSFASFEK AKEVQEYFIT RSKPSMARTL KQSIEKVHIN ANWVESIKKE DNLTHLVAQL SSN
001: MDQFKGEPRL PKFAVPKRYD LRLNPDLIAC TFTGTVAIDL DIVADTRFIV LNAADLSVND ASVSFTPPSS SKALAAPKVV LFEEDEILVL EFGEILPHGV
101: GVLKLGFNGV LNDKMKGFYR STYEHNGEKK NMAVTQFEPA DARRCFPCWD EPACKATFKI TLEVPTDLVA LSNMPIMEEK VNGNLKIVSY QESPIMSTYL
201: VAIVVGLFDY VEDHTSDGIK VRVYCQVGKA DQGKFALHVG AKTLDLFKEY FAVPYPLPKM DMIAIPDFAA GAMENYGLVT YRETALLYDE QHSAASNKQR
301: VATVVAHELA HQWFGNLVTM EWWTHLWLNE GFATWVSYLA TDSLFPEWKI WTQFLDESTE GLRLDGLEES HPIEVEVNHA AEIDEIFDAI SYRKGASVIR
401: MLQSYLGAEV FQKSLAAYIK NHAYSNAKTE DLWAALEAGS GEPVNKLMSS WTKQKGYPVV SAKIKDGKLE LEQSRFLSSG SPGEGQWIVP VTLCCGSYEK
501: RKNFLLESKS GAYDLKELLG CSIADGSDKI NGTCSWIKIN VDQAGFYRVK YDDSLAAGLR NATESQSLTS IDRYGILDDS FALTMARQQS LASLLTLCSA
601: YKKELDYTVL SNLIAISYKV VKIGADANQE LMSGIKHFFI GVFQFAAGKL GWDPKQGESH LDAMLRGEVL TALAVFGHDE TLKEAVRRFD AFLADRNTPL
701: LPPDIRRAAY VAVMQRANKS DKSGYESLLR VYRETDLSQE KTRILGSLAS CPDPTIVQDV LNFVLSDEVR NQDALYGLSG VSWEGREVAW KWLQEKWEYI
801: GNTWGSGFLI TRFISAVVSP FASFEKAKEV EEFFATRSKP SMARTLKQSI ERVHINANWV ESIKKEDNLT QLVAQLSSN
101: GVLKLGFNGV LNDKMKGFYR STYEHNGEKK NMAVTQFEPA DARRCFPCWD EPACKATFKI TLEVPTDLVA LSNMPIMEEK VNGNLKIVSY QESPIMSTYL
201: VAIVVGLFDY VEDHTSDGIK VRVYCQVGKA DQGKFALHVG AKTLDLFKEY FAVPYPLPKM DMIAIPDFAA GAMENYGLVT YRETALLYDE QHSAASNKQR
301: VATVVAHELA HQWFGNLVTM EWWTHLWLNE GFATWVSYLA TDSLFPEWKI WTQFLDESTE GLRLDGLEES HPIEVEVNHA AEIDEIFDAI SYRKGASVIR
401: MLQSYLGAEV FQKSLAAYIK NHAYSNAKTE DLWAALEAGS GEPVNKLMSS WTKQKGYPVV SAKIKDGKLE LEQSRFLSSG SPGEGQWIVP VTLCCGSYEK
501: RKNFLLESKS GAYDLKELLG CSIADGSDKI NGTCSWIKIN VDQAGFYRVK YDDSLAAGLR NATESQSLTS IDRYGILDDS FALTMARQQS LASLLTLCSA
601: YKKELDYTVL SNLIAISYKV VKIGADANQE LMSGIKHFFI GVFQFAAGKL GWDPKQGESH LDAMLRGEVL TALAVFGHDE TLKEAVRRFD AFLADRNTPL
701: LPPDIRRAAY VAVMQRANKS DKSGYESLLR VYRETDLSQE KTRILGSLAS CPDPTIVQDV LNFVLSDEVR NQDALYGLSG VSWEGREVAW KWLQEKWEYI
801: GNTWGSGFLI TRFISAVVSP FASFEKAKEV EEFFATRSKP SMARTLKQSI ERVHINANWV ESIKKEDNLT QLVAQLSSN
Arabidopsis Description
APM1Aminopeptidase [Source:UniProtKB/TrEMBL;Acc:A0A178UWR6]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.