Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034547.1-P | Field mustard | cytosol, plasma membrane, plastid | 96.11 | 96.56 |
| CDY45028 | Canola | cytosol, plasma membrane, plastid | 92.11 | 96.53 |
| AT4G33090.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 91.2 | 90.78 |
| CDX75323 | Canola | cytosol, plasma membrane, plastid | 90.17 | 90.38 |
| CDX68938 | Canola | cytosol, plasma membrane, plastid | 89.26 | 89.46 |
| KRH08282 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 27.2 | 82.35 |
| GSMUA_Achr10P... | Banana | extracellular | 14.97 | 77.51 |
| VIT_04s0008g01430.t01 | Wine grape | cytosol, plasma membrane, plastid | 73.94 | 73.52 |
| Solyc08g062630.2.1 | Tomato | nucleus, plastid, unclear | 72.23 | 72.23 |
| PGSC0003DMT400021155 | Potato | cytosol | 72.11 | 72.11 |
| KRH52219 | Soybean | cytosol, plasma membrane, plastid | 71.43 | 71.59 |
| KRH61539 | Soybean | cytosol | 71.89 | 69.89 |
| GSMUA_Achr10P... | Banana | cytosol | 32.69 | 67.93 |
| GSMUA_Achr10P... | Banana | mitochondrion | 33.49 | 59.19 |
| KRH39126 | Soybean | cytosol, extracellular, plastid | 13.83 | 49.59 |
| CDY65639 | Canola | cytosol | 2.63 | 17.42 |
| CDX91114 | Canola | cytosol | 6.4 | 16.23 |
| CDX85643 | Canola | cytosol | 10.97 | 15.69 |
| CDY09805 | Canola | cytosol | 10.97 | 15.64 |
| CDX69635 | Canola | cytosol | 10.97 | 15.64 |
Protein Annotations
| Gene3D:1.10.390.60 | Gene3D:1.25.50.20 | MapMan:19.4.5.6.5 | Gene3D:2.60.40.1730 | Gene3D:2.60.40.1910 | GO:A0A078GT01 |
| UniProt:A0A078GT01 | EnsemblPlants:CDY28282 | ProteinID:CDY28282 | ProteinID:CDY28282.1 | InterPro:ERAP1-like_C_dom | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004177 | GO:GO:0005488 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008233 | GO:GO:0008237 | GO:GO:0008270 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0046872 |
| EnsemblPlantsGene:GSBRNA2T00040025001 | MEROPS:M01.A25 | InterPro:M1_APN-typ | PFAM:PF01433 | PFAM:PF11838 | PRINTS:PR00756 |
| PANTHER:PTHR11533 | PANTHER:PTHR11533:SF183 | InterPro:Peptidase_M1 | InterPro:Peptidase_M1_N | SUPFAM:SSF55486 | SUPFAM:SSF63737 |
| UniParc:UPI0004EEB000 | SEG:seg | : | : | : | : |
Description
BnaC03g66770DAminopeptidase [Source:UniProtKB/TrEMBL;Acc:A0A078GT01]
Coordinates
chrLK032217:-:108457..112826
Molecular Weight (calculated)
98261.3 Da
IEP (calculated)
4.827
GRAVY (calculated)
-0.116
Length
875 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKFKGQPRL PKFAVPKRYD LRLIPDLIAC TFTGTVSIDV DIVADTRFIV LNAADISVND DSVSFTPLTS SKALAAPKVV LFEEDEILVL EFTEILPRGV
101: GVLQLGFSGI LNDKLKGFYK STYEHNGEKK NMAVTQFEPA DARKCFPCWD EPACKATFKI TLEVPAELVA LSNMPIVDEK VDGNVKVVSY QESPIMSTYL
201: VAIVVGLFDY VEDHTSDGIK VRVYCQVGKA DQGKFALHVG AKTLDLFKEY FAVPYPLPKM DMIAIPDFAA GAMENYGLVT YRETILLYDE QHSAASNKQR
301: VAIVVAHELA HQWFGNLVTM EWWTHLWLNE GFATWVSYLA IDSLFPEWKI WTQFLDESTD GLRLDGLEES HPIEVEVNHV AEIDEIFDAI SYMKGASVIR
401: MLQSYLGAEV FQQKSLAAYV KNHAYSNAKT EDLWSALEAE SGEPVNKLMS FWTKQTGYPV VSAKITDGKL ELEQSRFLSS GSPGEGQWIV PVTLCCGSYD
501: MRKNFLLESK SGVYDLKELL GSSIDDGSGT WIKINVDQAG FYRVKYDDTL AAGLRKATEN QSLTSIDRYG ILDDSFALSM ARQQSLASLL TLISAYKKEL
601: DYTVMSNLIV ISYKLVKIAA DANLELMSEI KQLFVGVFQF AAGKLGWDPK QGESHLDAML RGEVLTALAV FGHDETRKEA TRRFDAFLAD RNTSLLPPDL
701: RRAAYVAVMQ RANKSDKSGY ESLLRVYRET EMSEEKTRIL GSLACCPDPS IVQDVLNFVL SDEVVRNQDA LYGLYGVSWE GREGAWKWLQ EKWEYVEETW
801: GSGFLITRFI SAVVSPFASF EKAKEVEEFF AMRSKPSMAR TLKQSIERVH INANWVESIR KEDNLTQLVA HLSSN
101: GVLQLGFSGI LNDKLKGFYK STYEHNGEKK NMAVTQFEPA DARKCFPCWD EPACKATFKI TLEVPAELVA LSNMPIVDEK VDGNVKVVSY QESPIMSTYL
201: VAIVVGLFDY VEDHTSDGIK VRVYCQVGKA DQGKFALHVG AKTLDLFKEY FAVPYPLPKM DMIAIPDFAA GAMENYGLVT YRETILLYDE QHSAASNKQR
301: VAIVVAHELA HQWFGNLVTM EWWTHLWLNE GFATWVSYLA IDSLFPEWKI WTQFLDESTD GLRLDGLEES HPIEVEVNHV AEIDEIFDAI SYMKGASVIR
401: MLQSYLGAEV FQQKSLAAYV KNHAYSNAKT EDLWSALEAE SGEPVNKLMS FWTKQTGYPV VSAKITDGKL ELEQSRFLSS GSPGEGQWIV PVTLCCGSYD
501: MRKNFLLESK SGVYDLKELL GSSIDDGSGT WIKINVDQAG FYRVKYDDTL AAGLRKATEN QSLTSIDRYG ILDDSFALSM ARQQSLASLL TLISAYKKEL
601: DYTVMSNLIV ISYKLVKIAA DANLELMSEI KQLFVGVFQF AAGKLGWDPK QGESHLDAML RGEVLTALAV FGHDETRKEA TRRFDAFLAD RNTSLLPPDL
701: RRAAYVAVMQ RANKSDKSGY ESLLRVYRET EMSEEKTRIL GSLACCPDPS IVQDVLNFVL SDEVVRNQDA LYGLYGVSWE GREGAWKWLQ EKWEYVEETW
801: GSGFLITRFI SAVVSPFASF EKAKEVEEFF AMRSKPSMAR TLKQSIERVH INANWVESIR KEDNLTQLVA HLSSN
001: MDQFKGEPRL PKFAVPKRYD LRLNPDLIAC TFTGTVAIDL DIVADTRFIV LNAADLSVND ASVSFTPPSS SKALAAPKVV LFEEDEILVL EFGEILPHGV
101: GVLKLGFNGV LNDKMKGFYR STYEHNGEKK NMAVTQFEPA DARRCFPCWD EPACKATFKI TLEVPTDLVA LSNMPIMEEK VNGNLKIVSY QESPIMSTYL
201: VAIVVGLFDY VEDHTSDGIK VRVYCQVGKA DQGKFALHVG AKTLDLFKEY FAVPYPLPKM DMIAIPDFAA GAMENYGLVT YRETALLYDE QHSAASNKQR
301: VATVVAHELA HQWFGNLVTM EWWTHLWLNE GFATWVSYLA TDSLFPEWKI WTQFLDESTE GLRLDGLEES HPIEVEVNHA AEIDEIFDAI SYRKGASVIR
401: MLQSYLGAEV FQKSLAAYIK NHAYSNAKTE DLWAALEAGS GEPVNKLMSS WTKQKGYPVV SAKIKDGKLE LEQSRFLSSG SPGEGQWIVP VTLCCGSYEK
501: RKNFLLESKS GAYDLKELLG CSIADGSDKI NGTCSWIKIN VDQAGFYRVK YDDSLAAGLR NATESQSLTS IDRYGILDDS FALTMARQQS LASLLTLCSA
601: YKKELDYTVL SNLIAISYKV VKIGADANQE LMSGIKHFFI GVFQFAAGKL GWDPKQGESH LDAMLRGEVL TALAVFGHDE TLKEAVRRFD AFLADRNTPL
701: LPPDIRRAAY VAVMQRANKS DKSGYESLLR VYRETDLSQE KTRILGSLAS CPDPTIVQDV LNFVLSDEVR NQDALYGLSG VSWEGREVAW KWLQEKWEYI
801: GNTWGSGFLI TRFISAVVSP FASFEKAKEV EEFFATRSKP SMARTLKQSI ERVHINANWV ESIKKEDNLT QLVAQLSSN
101: GVLKLGFNGV LNDKMKGFYR STYEHNGEKK NMAVTQFEPA DARRCFPCWD EPACKATFKI TLEVPTDLVA LSNMPIMEEK VNGNLKIVSY QESPIMSTYL
201: VAIVVGLFDY VEDHTSDGIK VRVYCQVGKA DQGKFALHVG AKTLDLFKEY FAVPYPLPKM DMIAIPDFAA GAMENYGLVT YRETALLYDE QHSAASNKQR
301: VATVVAHELA HQWFGNLVTM EWWTHLWLNE GFATWVSYLA TDSLFPEWKI WTQFLDESTE GLRLDGLEES HPIEVEVNHA AEIDEIFDAI SYRKGASVIR
401: MLQSYLGAEV FQKSLAAYIK NHAYSNAKTE DLWAALEAGS GEPVNKLMSS WTKQKGYPVV SAKIKDGKLE LEQSRFLSSG SPGEGQWIVP VTLCCGSYEK
501: RKNFLLESKS GAYDLKELLG CSIADGSDKI NGTCSWIKIN VDQAGFYRVK YDDSLAAGLR NATESQSLTS IDRYGILDDS FALTMARQQS LASLLTLCSA
601: YKKELDYTVL SNLIAISYKV VKIGADANQE LMSGIKHFFI GVFQFAAGKL GWDPKQGESH LDAMLRGEVL TALAVFGHDE TLKEAVRRFD AFLADRNTPL
701: LPPDIRRAAY VAVMQRANKS DKSGYESLLR VYRETDLSQE KTRILGSLAS CPDPTIVQDV LNFVLSDEVR NQDALYGLSG VSWEGREVAW KWLQEKWEYI
801: GNTWGSGFLI TRFISAVVSP FASFEKAKEV EEFFATRSKP SMARTLKQSI ERVHINANWV ESIKKEDNLT QLVAQLSSN
Arabidopsis Description
APM1Aminopeptidase [Source:UniProtKB/TrEMBL;Acc:A0A178UWR6]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.