Factsheet for Bra034547.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45028	Canola	cytosol, plasma membrane, plastid	94.83	98.92
CDY28282	Canola	cytosol, plasma membrane, plastid	96.56	96.11
AT4G33090.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	91.85	91.01
Bra011412.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	90.24	90.03
KRH08282	Soybean	cytosol, endoplasmic reticulum, plasma membrane	27.21	82.01
GSMUA_Achr10P...	Banana	extracellular	15.04	77.51
VIT_04s0008g01430.t01	Wine grape	cytosol, plasma membrane, plastid	74.51	73.75
Solyc08g062630.2.1	Tomato	nucleus, plastid, unclear	72.45	72.11
PGSC0003DMT400021155	Potato	cytosol	72.22	71.89
KRH52219	Soybean	cytosol, plasma membrane, plastid	71.41	71.25
KRH61539	Soybean	cytosol	72.1	69.78
GSMUA_Achr10P...	Banana	cytosol	32.72	67.7
GSMUA_Achr10P...	Banana	mitochondrion	33.75	59.39
KRH39126	Soybean	cytosol, extracellular, plastid	13.66	48.77
Bra008823.1-P	Field mustard	cytosol	11.14	15.8
Bra023419.1-P	Field mustard	cytosol	10.91	15.52

Protein Annotations

Gene3D:1.10.390.60	Gene3D:1.25.50.20	MapMan:19.4.5.6.5	Gene3D:2.60.40.1730	Gene3D:2.60.40.1910	EnsemblPlantsGene:Bra034547
EnsemblPlants:Bra034547.1	EnsemblPlants:Bra034547.1-P	InterPro:ERAP1-like_C_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004177
GO:GO:0005488	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008237
GO:GO:0008270	GO:GO:0016787	GO:GO:0019538	GO:GO:0046872	MEROPS:M01.A25	InterPro:M1_APN-typ
UniProt:M4F0F3	PFAM:PF01433	PFAM:PF11838	PRINTS:PR00756	PANTHER:PTHR11533	PANTHER:PTHR11533:SF183
InterPro:Peptidase_M1	InterPro:Peptidase_M1_N	SUPFAM:SSF55486	SUPFAM:SSF63737	UniParc:UPI0002546946	SEG:seg

Description

AT4G33090 (E=0.0) APM1, ATAPM1 | APM1 (AMINOPEPTIDASE M1); aminopeptidase

Coordinates

chrA08:+:12882992..12887237

Molecular Weight (calculated)

97963.9 Da

IEP (calculated)

4.802

GRAVY (calculated)

-0.112

Length

871 amino acids

Sequence
(BLAST)

001: MDKFKGQPRL PKFAVPKRYD LRLIPDLIAC TFTGTVSIDV DIVADTRFIV LNAADISVND DSVSFTPLTS SKALAAPKVD LFEEDEILVL EFAEILPHGV
101: GVLQLGFSGI LNDKLKGFYK STYEHNGEKK NMAVTQFEPA DARKCFPCWD EPACKATFKI TLEVPTELVA LSNMPIMDEK VDGNVKVVSY QESPIMSTYL
201: VAIVVGLFDY VEDHTSDGIK VRVYCQVGKA DQGKFALHVG AKTLDLFKEY FAVPYPLPKM DMIAIPDFAA GAMENYGLVT YRETVLLYDE QHSAASNKQR
301: VAIVVAHELA HQWFGNLVTM EWWTHLWLNE GFATWVSYLA IDSLFPEWKI WTQFLDESTD GLRLDGLEES HPIEVEVNHV AEIDEIFDAI SYMKGASVIR
401: MLQSYLGAEV FQKSLAAYVK KHAYSNAKTE DLWSALEGES GEPVNKLMSF WTKQTGYPVV SAKIKDGKLE LEQSRFLSSG SPGEGQWIVP VTVCCGSYDM
501: RKNFLLESKS GVYDLKELFG CSIADGAWIK INVDQAGFYR VKYDDTLAAG LRNATENQSL TSIDRYGILD DSFALSMARQ QSLASLLTLI TGYKKELDYT
601: VLSNLIVISY KVVKISADAN LELMSEIKQL FIGVFQFAAG KLSWEPKQGE SHLDAMLRGE VLTALAVFGH DETLKEATRR FDAFLADRNT SLLPPDLRRA
701: AYVAVMQRAN KSDKSGYESL LRVYRETEMS EEKTRILGSL ACCPDPSIVQ DVLTFVLSDE VRNQDALYGL YDVSWEGREV AWKWLQEKWE YIEETWGSGF
801: LITRFISALV SPFASFEKAK EVEEFFATRS KPSMARTLKQ SIERVHINAN WVESIRKEDN LTQLVAHLSS N

Best Arabidopsis Sequence Match ( AT4G33090.1 )
(BLAST)

001: MDQFKGEPRL PKFAVPKRYD LRLNPDLIAC TFTGTVAIDL DIVADTRFIV LNAADLSVND ASVSFTPPSS SKALAAPKVV LFEEDEILVL EFGEILPHGV
101: GVLKLGFNGV LNDKMKGFYR STYEHNGEKK NMAVTQFEPA DARRCFPCWD EPACKATFKI TLEVPTDLVA LSNMPIMEEK VNGNLKIVSY QESPIMSTYL
201: VAIVVGLFDY VEDHTSDGIK VRVYCQVGKA DQGKFALHVG AKTLDLFKEY FAVPYPLPKM DMIAIPDFAA GAMENYGLVT YRETALLYDE QHSAASNKQR
301: VATVVAHELA HQWFGNLVTM EWWTHLWLNE GFATWVSYLA TDSLFPEWKI WTQFLDESTE GLRLDGLEES HPIEVEVNHA AEIDEIFDAI SYRKGASVIR
401: MLQSYLGAEV FQKSLAAYIK NHAYSNAKTE DLWAALEAGS GEPVNKLMSS WTKQKGYPVV SAKIKDGKLE LEQSRFLSSG SPGEGQWIVP VTLCCGSYEK
501: RKNFLLESKS GAYDLKELLG CSIADGSDKI NGTCSWIKIN VDQAGFYRVK YDDSLAAGLR NATESQSLTS IDRYGILDDS FALTMARQQS LASLLTLCSA
601: YKKELDYTVL SNLIAISYKV VKIGADANQE LMSGIKHFFI GVFQFAAGKL GWDPKQGESH LDAMLRGEVL TALAVFGHDE TLKEAVRRFD AFLADRNTPL
701: LPPDIRRAAY VAVMQRANKS DKSGYESLLR VYRETDLSQE KTRILGSLAS CPDPTIVQDV LNFVLSDEVR NQDALYGLSG VSWEGREVAW KWLQEKWEYI
801: GNTWGSGFLI TRFISAVVSP FASFEKAKEV EEFFATRSKP SMARTLKQSI ERVHINANWV ESIKKEDNLT QLVAQLSSN

Arabidopsis Description

APM1Aminopeptidase [Source:UniProtKB/TrEMBL;Acc:A0A178UWR6]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.