CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

plastid 3
cytosol 3
extracellular 1
mitochondrion 2
plasma membrane 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61539	Soybean	cytosol	95.88	93.0
KRH08282	Soybean	cytosol, endoplasmic reticulum, plasma membrane	30.47	92.04
KRH61543	Soybean	cytosol	8.59	85.23
GSMUA_Achr10P...	Banana	extracellular	14.89	76.92
PGSC0003DMT400021155	Potato	cytosol	75.6	75.43
Solyc08g062630.2.1	Tomato	nucleus, plastid, unclear	75.49	75.31
AT4G33090.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	74.11	73.61
CDX75323	Canola	cytosol, plasma membrane, plastid	73.54	73.54
Bra011412.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	73.42	73.42
CDX68938	Canola	cytosol, plasma membrane, plastid	73.2	73.2
CDY28282	Canola	cytosol, plasma membrane, plastid	71.59	71.43
Bra034547.1-P	Field mustard	cytosol, plasma membrane, plastid	71.25	71.41
CDY45028	Canola	cytosol, plasma membrane, plastid	67.93	71.02
GSMUA_Achr10P...	Banana	cytosol	31.84	66.03
KRH39126	Soybean	cytosol, extracellular, plastid	17.3	61.89
GSMUA_Achr10P...	Banana	mitochondrion	35.05	61.82
KRH47528	Soybean	cytosol	27.03	46.18
KRH06096	Soybean	extracellular, golgi	2.41	31.34
VIT_17s0000g09920.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	12.14	29.69
KRH52220	Soybean	mitochondrion	6.19	25.23
KRG93029	Soybean	nucleus	11.23	16.07

Protein Annotations

Gene3D:1.10.390.60	Gene3D:1.25.50.20	EntrezGene:100798014	MapMan:19.4.5.6.5	Gene3D:2.60.40.1730	Gene3D:2.60.40.1910
EMBL:ACUP02003414	ncoils:Coil	InterPro:ERAP1-like_C_dom	EnsemblPlantsGene:GLYMA_06G053800	GO:GO:0003674	GO:GO:0003824
GO:GO:0004177	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008237	GO:GO:0008270
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0042277	GO:GO:0043171
GO:GO:0046872	GO:GO:0070006	UniProt:I1K8E3	EnsemblPlants:KRH52219	ProteinID:KRH52219	ProteinID:KRH52219.1
MEROPS:M01.A25	InterPro:M1_APN-typ	PFAM:PF01433	PFAM:PF11838	PRINTS:PR00756	PANTHER:PTHR11533
PANTHER:PTHR11533:SF183	InterPro:Peptidase_M1	InterPro:Peptidase_M1_N	SUPFAM:SSF55486	SUPFAM:SSF63737	UniParc:UPI000233A2B5
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:4073333..4079428

Molecular Weight (calculated)

98649.6 Da

IEP (calculated)

5.582

GRAVY (calculated)

-0.155

Length

873 amino acids

Sequence
(BLAST)

001: MDQFKGKPRL PKFAVPKRYD LRLKPDLVAH RFAGSVAVHL DIVPATSFIV LNAAELSVSN DAVSFTNQDS SKVIKPSRVE LFENDEILVL EFPEELPIGF
101: GVLSIRFEGI LNDRMKGFYR STYEHNGEKK TMAVTQFAPA DARRCFPCWD EPSCKASFKI TLDVPSELVA LSNMPIVEEI TDGNLKTVSY QESPIMSTYL
201: VAVVVGLFDY VEDHTSDGVK VRVYCQVGKA NQGKFALDVA VKSLELYKGY FATPYSLPKL DMIAIPDFAA GAMENYGLVT YRETALLYDD QHSAAANKQR
301: VATVVAHELA HQWFGNLVTM EWWTHVWLNE GFATWVSYLA TDNCFPEWKI WSQFLHESTE GLRLDGLAES HPIEVEINHA CEIDEIFDAI SYKKGASVIR
401: MLQSYLGAEC FQRSLASYIK RHACSNAKTE DLWAALEEGS GEHVNKLMTS WTKQKGYPVV SVKVNDQKLE FNQSQFLSSG AQGEGHWIVP ITLCFGSYDV
501: CKSFLLQSKS ETHEVKEFLG STDKGVNCWI KLNVDQAGFY RVKYDELLAA RLRYAVEKQL LSASDRFGIL DDSFALCMAC QESLPSLINL MGSYREEVDY
601: TVLSNLITIS LKVQRIAADA VPDLLEYFKQ FFINLFQYSA ERLGWEPKPG ESHVDAMLRG EILTALAMFG HNLTLDEASK RFLAFLENRN TPLLPPDIRK
701: AAYVAVMQRA SKSNRSDYES LLKVYRETDL SQEKTRILGS LASSRDPDLI LEALNFMLSS EVRSQDAVFG LAVTQEGRNV AWAWLKENWE HLIKTYGSGF
801: LITRFVSAVV SPFASFEKAK EVEEFFASHA MPFIARTLRQ SLERVNINAN WVQNVQNENR LGDAVKELAY RKY

Best Arabidopsis Sequence Match ( AT4G33090.1 )
(BLAST)

001: MDQFKGEPRL PKFAVPKRYD LRLNPDLIAC TFTGTVAIDL DIVADTRFIV LNAADLSVND ASVSFTPPSS SKALAAPKVV LFEEDEILVL EFGEILPHGV
101: GVLKLGFNGV LNDKMKGFYR STYEHNGEKK NMAVTQFEPA DARRCFPCWD EPACKATFKI TLEVPTDLVA LSNMPIMEEK VNGNLKIVSY QESPIMSTYL
201: VAIVVGLFDY VEDHTSDGIK VRVYCQVGKA DQGKFALHVG AKTLDLFKEY FAVPYPLPKM DMIAIPDFAA GAMENYGLVT YRETALLYDE QHSAASNKQR
301: VATVVAHELA HQWFGNLVTM EWWTHLWLNE GFATWVSYLA TDSLFPEWKI WTQFLDESTE GLRLDGLEES HPIEVEVNHA AEIDEIFDAI SYRKGASVIR
401: MLQSYLGAEV FQKSLAAYIK NHAYSNAKTE DLWAALEAGS GEPVNKLMSS WTKQKGYPVV SAKIKDGKLE LEQSRFLSSG SPGEGQWIVP VTLCCGSYEK
501: RKNFLLESKS GAYDLKELLG CSIADGSDKI NGTCSWIKIN VDQAGFYRVK YDDSLAAGLR NATESQSLTS IDRYGILDDS FALTMARQQS LASLLTLCSA
601: YKKELDYTVL SNLIAISYKV VKIGADANQE LMSGIKHFFI GVFQFAAGKL GWDPKQGESH LDAMLRGEVL TALAVFGHDE TLKEAVRRFD AFLADRNTPL
701: LPPDIRRAAY VAVMQRANKS DKSGYESLLR VYRETDLSQE KTRILGSLAS CPDPTIVQDV LNFVLSDEVR NQDALYGLSG VSWEGREVAW KWLQEKWEYI
801: GNTWGSGFLI TRFISAVVSP FASFEKAKEV EEFFATRSKP SMARTLKQSI ERVHINANWV ESIKKEDNLT QLVAQLSSN

Arabidopsis Description

APM1Aminopeptidase [Source:UniProtKB/TrEMBL;Acc:A0A178UWR6]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.