CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:

plastid 3
cytosol 2
plasma membrane 1
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	40.98	23.75
VIT_17s0000g09920.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	32.38	22.13
KRH08282	Soybean	cytosol, endoplasmic reticulum, plasma membrane	25.0	21.11
KRH61539	Soybean	cytosol	63.93	17.33
KRH52219	Soybean	cytosol, plasma membrane, plastid	61.89	17.3
CDY45028	Canola	cytosol, plasma membrane, plastid	47.95	14.01
CDY28282	Canola	cytosol, plasma membrane, plastid	49.59	13.83
Bra034547.1-P	Field mustard	cytosol, plasma membrane, plastid	48.77	13.66
AT4G33090.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	49.18	13.65
Solyc08g062630.2.1	Tomato	nucleus, plastid, unclear	48.36	13.49
CDX68938	Canola	cytosol, plasma membrane, plastid	47.95	13.4
CDX75323	Canola	cytosol, plasma membrane, plastid	47.95	13.4
Bra011412.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	47.54	13.29
PGSC0003DMT400021155	Potato	cytosol	47.13	13.14
KRH47528	Soybean	cytosol	14.75	7.05
KRG93029	Soybean	nucleus	11.89	4.75
KRH52220	Soybean	mitochondrion	2.46	2.8
GSMUA_Achr10P...	Banana	extracellular	0.82	1.18
GSMUA_Achr10P...	Banana	mitochondrion	2.05	1.01
KRH06096	Soybean	extracellular, golgi	0.0	0.0
KRH61543	Soybean	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.60.40.1730	MapMan:35.1	EMBL:ACUP02005915	EnsemblPlantsGene:GLYMA_09G179600	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0042277	GO:GO:0043171	GO:GO:0070006	UniProt:K7LEL3	EnsemblPlants:KRH39126
ProteinID:KRH39126	ProteinID:KRH39126.1	PANTHER:PTHR11533	PANTHER:PTHR11533:SF203	InterPro:Peptidase_M1	SUPFAM:SSF63737
UniParc:UPI000294DD75	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:40442076..40444601

Molecular Weight (calculated)

27490.3 Da

IEP (calculated)

7.211

GRAVY (calculated)

-0.068

Length

244 amino acids

Sequence
(BLAST)

001: MDQFKGQPCF LKFSVPKCYN IRLKINLIAH RFASFAIVNP DIVIATSFIV LNTTKLSVSN DAISFTNQGS SKVIKPSRVK LFENDEIMVL EFTEELPIGF
101: SVLSIRSKVI LNDRVKGFYR STYEHNGEKK SMAVRQFEPI DAKQCIPCWD EAACKATFKI TLDVTSELVA LSNMPIVEEI TDGNLKTVSY QESPIMWSKF
201: ECIIKLTEDP WVALEEGSGE PVNKSMALWT KQKGYPAVSV KVND

Best Arabidopsis Sequence Match ( AT4G33090.1 )
(BLAST)

001: MDQFKGEPRL PKFAVPKRYD LRLNPDLIAC TFTGTVAIDL DIVADTRFIV LNAADLSVND ASVSFTPPSS SKALAAPKVV LFEEDEILVL EFGEILPHGV
101: GVLKLGFNGV LNDKMKGFYR STYEHNGEKK NMAVTQFEPA DARRCFPCWD EPACKATFKI TLEVPTDLVA LSNMPIMEEK VNGNLKIVSY QESPIMSTYL
201: VAIVVGLFDY VEDHTSDGIK VRVYCQVGKA DQGKFALHVG AKTLDLFKEY FAVPYPLPKM DMIAIPDFAA GAMENYGLVT YRETALLYDE QHSAASNKQR
301: VATVVAHELA HQWFGNLVTM EWWTHLWLNE GFATWVSYLA TDSLFPEWKI WTQFLDESTE GLRLDGLEES HPIEVEVNHA AEIDEIFDAI SYRKGASVIR
401: MLQSYLGAEV FQKSLAAYIK NHAYSNAKTE DLWAALEAGS GEPVNKLMSS WTKQKGYPVV SAKIKDGKLE LEQSRFLSSG SPGEGQWIVP VTLCCGSYEK
501: RKNFLLESKS GAYDLKELLG CSIADGSDKI NGTCSWIKIN VDQAGFYRVK YDDSLAAGLR NATESQSLTS IDRYGILDDS FALTMARQQS LASLLTLCSA
601: YKKELDYTVL SNLIAISYKV VKIGADANQE LMSGIKHFFI GVFQFAAGKL GWDPKQGESH LDAMLRGEVL TALAVFGHDE TLKEAVRRFD AFLADRNTPL
701: LPPDIRRAAY VAVMQRANKS DKSGYESLLR VYRETDLSQE KTRILGSLAS CPDPTIVQDV LNFVLSDEVR NQDALYGLSG VSWEGREVAW KWLQEKWEYI
801: GNTWGSGFLI TRFISAVVSP FASFEKAKEV EEFFATRSKP SMARTLKQSI ERVHINANWV ESIKKEDNLT QLVAQLSSN

Arabidopsis Description

APM1Aminopeptidase [Source:UniProtKB/TrEMBL;Acc:A0A178UWR6]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.