CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plasma membrane 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52219	Soybean	cytosol, plasma membrane, plastid	93.0	95.88
KRH08282	Soybean	cytosol, endoplasmic reticulum, plasma membrane	30.44	94.81
KRH61543	Soybean	cytosol	8.33	85.23
GSMUA_Achr10P...	Banana	extracellular	14.78	78.7
PGSC0003DMT400021155	Potato	cytosol	73.56	75.66
Solyc08g062630.2.1	Tomato	nucleus, plastid, unclear	73.33	75.43
CDX75323	Canola	cytosol, plasma membrane, plastid	72.11	74.34
AT4G33090.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	72.56	74.29
Bra011412.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	72.0	74.23
CDX68938	Canola	cytosol, plasma membrane, plastid	72.0	74.23
Bra034547.1-P	Field mustard	cytosol, plasma membrane, plastid	69.78	72.1
CDY28282	Canola	cytosol, plasma membrane, plastid	69.89	71.89
CDY45028	Canola	cytosol, plasma membrane, plastid	66.44	71.62
GSMUA_Achr10P...	Banana	cytosol	31.56	67.46
KRH39126	Soybean	cytosol, extracellular, plastid	17.33	63.93
GSMUA_Achr10P...	Banana	mitochondrion	33.89	61.62
KRH47528	Soybean	cytosol	25.78	45.4
KRH06096	Soybean	extracellular, golgi	2.44	32.84
VIT_17s0000g09920.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	12.11	30.53
KRH52220	Soybean	mitochondrion	6.11	25.7
KRG93029	Soybean	nucleus	11.11	16.39

Protein Annotations

Gene3D:1.10.390.60	Gene3D:1.25.50.20	EntrezGene:100811437	MapMan:19.4.5.6.5	Gene3D:2.60.40.1730	Gene3D:2.60.40.1910
EMBL:ACUP02002171	InterPro:ERAP1-like_C_dom	EnsemblPlantsGene:GLYMA_04G053300	GO:GO:0003674	GO:GO:0003824	GO:GO:0004177
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008237	GO:GO:0008270	GO:GO:0009056
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0042277	GO:GO:0043171	GO:GO:0046872
GO:GO:0070006	UniProt:I1JTZ0	EnsemblPlants:KRH61539	ProteinID:KRH61539	ProteinID:KRH61539.1	MEROPS:M01.A25
InterPro:M1_APN-typ	PFAM:PF01433	PFAM:PF11838	PRINTS:PR00756	PANTHER:PTHR11533	PANTHER:PTHR11533:SF183
InterPro:Peptidase_M1	InterPro:Peptidase_M1_N	SUPFAM:SSF55486	SUPFAM:SSF63737	UniParc:UPI00023C01EB	SEG:seg

Description

hypothetical protein

Coordinates

chr4:+:4339647..4346200

Molecular Weight (calculated)

101825.0 Da

IEP (calculated)

5.492

GRAVY (calculated)

-0.132

Length

900 amino acids

Sequence
(BLAST)

001: MDQFKGQPRL PKFVVPKRYD IRLKPDLVAH RFAGSVAVNL DIVAATSFIV LNAAELDVSN DAVSFTNQDS SKVIKPSRVE LFENDEILVL EFPEELPIGF
101: GVLSIRFEGI LNDRMKGFYR STYEHNGEKK TMAVTQFEPA DARRCFPCWD EPACKATFKI TLDVPSELVA LSNMPIVEEI TDGDLKTVSY QESPIMSTYL
201: VAVVVGLFDY VEDHTSDGVK VRVYCQVGKA NQGKFALDVA VKTLELYKGY FATPYSLPKL DMIAIPDFAA GAMENYGLVT YRETALLYDD QHSAAANKQR
301: VATVVAHELA HQWFGNLVTM EWWTHLWLNE GFATWVSYLA TDSCFPEWKI WSQFLHESTE GLKLDGLAES HPIEVEINHA CEIDEIFDAI SYRKGASVIR
401: MLQSYLGAEC FQRSLASYIK RHACSNAKTE DLWAALEEGS GEPVNKLMTS WTKQKGYPVV SVKVNDQKLE FNQSQFLSSG AQGEGHWIVP ITLCFGSYDV
501: HKSFLLQSKS ETHDVKDFLG STHKGLNCWI KLNVDQAGFY RVKYDELLAA RLRYAVEKQL LSASDRFGIL DDSFALCMAR QESLTSLINL MGSYREEVDY
601: TVLSNLITVM LFFKSCSFIT WVIYVGHNSN SFVWQISLKV QRIAADAVPD LLEYFKQFFI NLFQYSAERL GWEPKPGESH VDAMLRGEIL TALAMFGHDL
701: TLDEASKRFQ AFLENRNTPL LPPDIRKAAY VAVMQRASKS NRSGYESLLK VYKEADLSQE KTRILGSLAS SRDPDLILEA LNFMLSSEVR SQDAVFGLAV
801: TREGRDVAWA WLKENWEHLI KTYGSGFLIT RFVGAVVSPF ASFEKAKEVE EFFATHAMPS IARTLRQSLE RVNINANWVQ SVQNENRLGD AMKELAYRVY

Best Arabidopsis Sequence Match ( AT4G33090.1 )
(BLAST)

001: MDQFKGEPRL PKFAVPKRYD LRLNPDLIAC TFTGTVAIDL DIVADTRFIV LNAADLSVND ASVSFTPPSS SKALAAPKVV LFEEDEILVL EFGEILPHGV
101: GVLKLGFNGV LNDKMKGFYR STYEHNGEKK NMAVTQFEPA DARRCFPCWD EPACKATFKI TLEVPTDLVA LSNMPIMEEK VNGNLKIVSY QESPIMSTYL
201: VAIVVGLFDY VEDHTSDGIK VRVYCQVGKA DQGKFALHVG AKTLDLFKEY FAVPYPLPKM DMIAIPDFAA GAMENYGLVT YRETALLYDE QHSAASNKQR
301: VATVVAHELA HQWFGNLVTM EWWTHLWLNE GFATWVSYLA TDSLFPEWKI WTQFLDESTE GLRLDGLEES HPIEVEVNHA AEIDEIFDAI SYRKGASVIR
401: MLQSYLGAEV FQKSLAAYIK NHAYSNAKTE DLWAALEAGS GEPVNKLMSS WTKQKGYPVV SAKIKDGKLE LEQSRFLSSG SPGEGQWIVP VTLCCGSYEK
501: RKNFLLESKS GAYDLKELLG CSIADGSDKI NGTCSWIKIN VDQAGFYRVK YDDSLAAGLR NATESQSLTS IDRYGILDDS FALTMARQQS LASLLTLCSA
601: YKKELDYTVL SNLIAISYKV VKIGADANQE LMSGIKHFFI GVFQFAAGKL GWDPKQGESH LDAMLRGEVL TALAVFGHDE TLKEAVRRFD AFLADRNTPL
701: LPPDIRRAAY VAVMQRANKS DKSGYESLLR VYRETDLSQE KTRILGSLAS CPDPTIVQDV LNFVLSDEVR NQDALYGLSG VSWEGREVAW KWLQEKWEYI
801: GNTWGSGFLI TRFISAVVSP FASFEKAKEV EEFFATRSKP SMARTLKQSI ERVHINANWV ESIKKEDNLT QLVAQLSSN

Arabidopsis Description

APM1Aminopeptidase [Source:UniProtKB/TrEMBL;Acc:A0A178UWR6]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.