Factsheet for Bra023419.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 5
cytosol 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85643	Canola	cytosol	98.69	98.69
Bra008823.1-P	Field mustard	cytosol	90.03	89.74
AT5G13520.1	Thale cress	cytosol	82.52	81.98
VIT_13s0067g03300.t01	Wine grape	cytosol	74.51	74.63
HORVU5Hr1G112530.1	Barley	extracellular	48.37	71.84
Solyc04g049720.2.1	Tomato	cytosol	63.07	70.96
KRG93029	Soybean	nucleus	70.1	70.33
PGSC0003DMT400074587	Potato	cytosol	68.79	68.79
GSMUA_Achr4P16860_001	Banana	cytosol	60.46	67.15
EER93198	Sorghum	cytosol	66.67	66.78
Os03t0819100-01	Rice	cytosol, plasma membrane, plastid	66.18	66.28
Zm00001d034630_P001	Maize	extracellular	65.69	65.79
HORVU0Hr1G014070.1	Barley	cytosol, plasma membrane, plastid	59.15	65.7
TraesCS5A01G474300.1	Wheat	cytosol	64.05	63.95
TraesCS5D01G487100.1	Wheat	cytosol	61.44	61.34
TraesCS5B01G487400.1	Wheat	cytosol	61.6	61.3
Zm00001d017093_P001	Maize	cytosol	19.77	33.8
Zm00001d006252_P001	Maize	peroxisome	19.61	33.33
Zm00001d018463_P001	Maize	peroxisome	19.44	33.06
Zm00001d006253_P001	Maize	peroxisome	19.28	32.78
Zm00001d044280_P001	Maize	peroxisome	19.28	32.78
Bra034547.1-P	Field mustard	cytosol, plasma membrane, plastid	15.52	10.91
Bra011412.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	15.52	10.88

Protein Annotations

KEGG:00590+3.3.2.6	Gene3D:1.10.1740.60	Gene3D:1.10.390.10	Gene3D:1.25.40.320	MapMan:19.4.5.6.5	Gene3D:2.60.40.1730
InterPro:ARM-type_fold	EnsemblPlantsGene:Bra023419	EnsemblPlants:Bra023419.1	EnsemblPlants:Bra023419.1-P	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008237	GO:GO:0008270
GO:GO:0016787	GO:GO:0019538	InterPro:IPR027268	InterPro:IPR038502	InterPro:M1_LTA-4_hydro/amino_C_sf	InterPro:M1_LTA4H
UniProt:M4E3R6	PFAM:PF01433	PFAM:PF09127	PRINTS:PR00756	PANTHER:PTHR11533	PANTHER:PTHR11533:SF174
InterPro:Peptidase_M1	InterPro:Peptidase_M1_C	InterPro:Peptidase_M1_N	InterPro:Peptidase_M4/M1_CTD_sf	SMART:SM01263	SUPFAM:SSF48371
SUPFAM:SSF55486	SUPFAM:SSF63737	UniParc:UPI00025434EE	SEG:seg	:	:

Description

AT5G13520 (E=3e-308) | peptidase M1 family protein

Coordinates

chrA02:-:3294061..3296689

Molecular Weight (calculated)

68944.0 Da

IEP (calculated)

4.936

GRAVY (calculated)

-0.257

Length

612 amino acids

Sequence
(BLAST)

001: MAPIDPHSFT DSTHPLTTHV SLSLYLSFPT STIHASALLT LSSPFSGTLS LDSRSLSLSS ILDPQTLHPL PHSLSPTPDP IRGTEISVVL SGQSQILLIY
101: STSPAASALQ WLSPPQTFSK THPYVYTQCQ AIHARSIFPC QDTPARRIRY DVVMNIPASL SAVMSARHVR RRLPLPEEAT HLDSSLCWCA EDRVVEEFVM
201: EQPIPPYLFA FAVGELGFRE VGPRTRVYAE SADVEVLDAA EVEFAGTEEM IRQGEKLFGE YDWERFDLLV LPPSFPYGGM ENPRMVFLTP TVIKGDASGG
301: QVVAHELAHS WTGNLITNVN NEHFWLNEGF TTYAERRIVE VVQGADIATL NMGIGWRGLK DEMERFKDNL ECTKLKNNQQ GVDPDDVYSQ VPYEKGFQFV
401: LRIERQVGRT AFDEFLKKYI ATFKFKSIDT DTFLDFLKAN IPGIEKEINL ELWTEGVGIP EDAYEPVSTI YTKIISLAEE FKQGKMPSED EVAEWKGQEW
501: ELYLENLPKS CEPSQVIALD KRYRLAESKD YEVKVSFLQV AISSKCREYH GEVEKTLKTV GRMKYLRPLF NALAQSGGTE EKQLAKQVFA EARETYHPIA
601: QGVVESILSK YI

Best Arabidopsis Sequence Match ( AT5G13520.1 )
(BLAST)

001: MAPIDPHSFT DSSHPLTTHV ALSLYLDFNT SIIHGSALLT LSSAFSGELS LDTRCISIAM VLDPLTLEPI PYSVSTTPDR IRGTEVVVVL SGQSSLLIVY
101: STSPSASALQ WLSPLQTFSK LHPYVYTQCQ AIHARSIFPC QDTPAARIRY DVVMNIPNSL SAVMSARHVR RRLAVPEEAK HLEAGSLGSS LWCGEDRVVE
201: EFAMEQPIPP YLFAFAVGEL GFREVGPRTR VYTESAAIEV LDAAALEFAG TEDMIKQGEK LFGDYEWERF DLLVLPPSFP YGGMENPRMV FLTPTVIKGD
301: ATGAQVVAHE LAHSWTGNLI TNINNEHFWL NEGFTTYAER RIVEVVQGAD IATLNIGIGW RGLTDEMERF KDNLECTKLW NKQEGVDPDD VYSQVPYEKG
401: FQFVLRIERQ IGRTAFDEFL KKYIATFKFK SIDTNTFLEF LKANIPGIEK EINLQLWTEG VGIPEDAYEP VSTIYTKIIS LAKEFKEGKM PSEDDVAEWN
501: GQEWELYLEN LPKSCEPSQV MALDKRYRLA ESKDYEVKVS FLQLAVTSKC REYHGEVKKT LKEVGRMKYL RPLFTALAQS GGTEEKQLAK QVFAEARETY
601: HPIAQGVVES ILSKYI

Arabidopsis Description

LKHA4Leukotriene A-4 hydrolase homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9FY49]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.