Factsheet for GSMUA_Achr4P16860_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX91114	Canola	cytosol	44.28	70.72
HORVU5Hr1G112530.1	Barley	extracellular	52.63	70.39
EER93198	Sorghum	cytosol	71.14	64.16
Zm00001d034630_P001	Maize	extracellular	70.96	63.99
HORVU0Hr1G014070.1	Barley	cytosol, plasma membrane, plastid	63.88	63.88
VIT_13s0067g03300.t01	Wine grape	cytosol	70.6	63.67
KRG93029	Soybean	nucleus	70.24	63.44
TraesCS5A01G474300.1	Wheat	cytosol	69.87	62.81
Os03t0819100-01	Rice	cytosol, plasma membrane, plastid	69.51	62.68
CDY09805	Canola	cytosol	68.6	61.56
Bra008823.1-P	Field mustard	cytosol	68.24	61.24
CDX69635	Canola	cytosol	68.24	61.24
CDX85643	Canola	cytosol	67.7	60.95
PGSC0003DMT400074587	Potato	cytosol	67.7	60.95
Bra023419.1-P	Field mustard	cytosol	67.15	60.46
Solyc04g049720.2.1	Tomato	cytosol	59.17	59.93
TraesCS5D01G487100.1	Wheat	cytosol	65.88	59.22
TraesCS5B01G487400.1	Wheat	cytosol	66.06	59.19
AT5G13520.1	Thale cress	cytosol	64.43	57.63
Zm00001d018463_P001	Maize	peroxisome	24.32	37.22
Zm00001d017093_P001	Maize	cytosol	23.96	36.87
Zm00001d006253_P001	Maize	peroxisome	23.96	36.67
Zm00001d006252_P001	Maize	peroxisome	23.77	36.39
Zm00001d044280_P001	Maize	peroxisome	23.59	36.11
GSMUA_Achr10P...	Banana	extracellular	6.35	20.71
GSMUA_Achr10P...	Banana	cytosol	12.16	15.91
GSMUA_Achr6P35860_001	Banana	plasma membrane	15.24	9.96
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	5.08	7.89
GSMUA_Achr10P...	Banana	mitochondrion	4.17	4.65

Protein Annotations

KEGG:00590+3.3.2.6	Gene3D:1.10.1740.60	Gene3D:1.10.390.10	Gene3D:1.25.40.320	MapMan:19.4.5.6.5	Gene3D:2.60.40.1730
InterPro:ARM-type_fold	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0008237	GO:GO:0008270	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr4G16860_001	EnsemblPlants:GSMUA_Achr4P16860_001
EnsemblPlants:GSMUA_Achr4T16860_001	InterPro:IPR027268	InterPro:IPR038502	UniProt:M0SPK0	InterPro:M1_LTA-4_hydro/amino_C_sf	PFAM:PF01433
PFAM:PF09127	PANTHER:PTHR11533	PANTHER:PTHR11533:SF174	InterPro:Peptidase_M1	InterPro:Peptidase_M1_C	InterPro:Peptidase_M1_N
InterPro:Peptidase_M4/M1_CTD_sf	SMART:SM01263	SUPFAM:SSF48371	SUPFAM:SSF55486	SUPFAM:SSF63737	UniParc:UPI0002968B8D
SEG:seg	:	:	:	:	:

Description

Putative Leukotriene A-4 hydrolase [Source:GMGC_GENE;Acc:GSMUA_Achr4G16860_001]

Coordinates

chr4:+:15399824..15407005

Molecular Weight (calculated)

61438.4 Da

IEP (calculated)

6.129

GRAVY (calculated)

-0.164

Length

551 amino acids

Sequence
(BLAST)

001: MARLDPHSYT ESSQPLAKHV ALTLYFDFAA RTIHGSALLT LPAAHTGPLL LDTRSLVIHS VLDRHTNAPI PFSFPSDPTP DPVLGQPLSL SLSAQSAALV
101: VFSTSPSSSA LQWLSPAQTA SKAHPFVYTQ CQSIHARSLF PCQDTPAARL VFSARLNLPH PLTAVMAAAR AAAPQEFIMD RPIPAYLFAF AAGDIAARDV
201: GWGRFDLLVL PPSFPYGGME NPMMVFLTPT VIKGDASGAQ VVAHELAHSW TGNLITNKTN EHFWLNEGFT TYAERRIVEV VQGEETAALN MGIGWRGLND
301: EMERFKDNME FTKLKPNLEG IDPDEIYSQV PYEKGFQFLW RIERQVGRPT FDEFLKKYIA KFKFQSIDTE TFLEFLKANL PGIENQIDLK QWVEGTGIPP
401: DAMEPLSSIY SKIVSLSNEF KLGKIPKEQE VANWSGQEWE LYIENLPKSV EPSQIAALDA HYRLSESRDY EVKVAFLQLA ISSGCKEYFA EVERTLKQVG
501: RMKYLRPLYT ALVQGSAEEA KMSARRIFAE ARDTYHPIAQ GVVESILAKH S

Best Arabidopsis Sequence Match ( AT5G13520.1 )
(BLAST)

001: MAPIDPHSFT DSSHPLTTHV ALSLYLDFNT SIIHGSALLT LSSAFSGELS LDTRCISIAM VLDPLTLEPI PYSVSTTPDR IRGTEVVVVL SGQSSLLIVY
101: STSPSASALQ WLSPLQTFSK LHPYVYTQCQ AIHARSIFPC QDTPAARIRY DVVMNIPNSL SAVMSARHVR RRLAVPEEAK HLEAGSLGSS LWCGEDRVVE
201: EFAMEQPIPP YLFAFAVGEL GFREVGPRTR VYTESAAIEV LDAAALEFAG TEDMIKQGEK LFGDYEWERF DLLVLPPSFP YGGMENPRMV FLTPTVIKGD
301: ATGAQVVAHE LAHSWTGNLI TNINNEHFWL NEGFTTYAER RIVEVVQGAD IATLNIGIGW RGLTDEMERF KDNLECTKLW NKQEGVDPDD VYSQVPYEKG
401: FQFVLRIERQ IGRTAFDEFL KKYIATFKFK SIDTNTFLEF LKANIPGIEK EINLQLWTEG VGIPEDAYEP VSTIYTKIIS LAKEFKEGKM PSEDDVAEWN
501: GQEWELYLEN LPKSCEPSQV MALDKRYRLA ESKDYEVKVS FLQLAVTSKC REYHGEVKKT LKEVGRMKYL RPLFTALAQS GGTEEKQLAK QVFAEARETY
601: HPIAQGVVES ILSKYI

Arabidopsis Description

LKHA4Leukotriene A-4 hydrolase homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9FY49]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.