Factsheet for Zm00001d006253_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018463_P001	Maize	peroxisome	98.61	98.61
Zm00001d044280_P001	Maize	peroxisome	98.06	98.06
Zm00001d006252_P001	Maize	peroxisome	97.5	97.5
Zm00001d017093_P001	Maize	cytosol	83.33	83.8
CDX91114	Canola	cytosol	31.39	32.75
Zm00001d034630_P001	Maize	extracellular	44.72	26.35
Os03t0819100-01	Rice	cytosol, plasma membrane, plastid	40.83	24.06
GSMUA_Achr4P16860_001	Banana	cytosol	36.67	23.96
Solyc04g049720.2.1	Tomato	cytosol	32.5	21.51
VIT_13s0067g03300.t01	Wine grape	cytosol	35.28	20.79
KRG93029	Soybean	nucleus	34.17	20.16
CDY09805	Canola	cytosol	34.17	20.03
CDX69635	Canola	cytosol	34.17	20.03
Bra008823.1-P	Field mustard	cytosol	34.17	20.03
PGSC0003DMT400074587	Potato	cytosol	33.89	19.93
CDX85643	Canola	cytosol	33.06	19.44
AT5G13520.1	Thale cress	cytosol	33.06	19.32
Bra023419.1-P	Field mustard	cytosol	32.78	19.28
Zm00001d011075_P060	Maize	mitochondrion	5.83	3.61
Zm00001d036958_P001	Maize	cytosol	1.39	3.4
Zm00001d012310_P001	Maize	cytosol	1.11	3.01
Zm00001d016373_P003	Maize	plastid	7.22	2.96
Zm00001d032282_P012	Maize	plasma membrane	6.39	2.63
Zm00001d020225_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	6.67	2.59
Zm00001d047903_P001	Maize	cytosol	0.28	1.11
Zm00001d053711_P001	Maize	cytosol	0.28	1.11
Zm00001d018547_P001	Maize	cytosol	0.0	0.0
Zm00001d042539_P001	Maize	vacuole	0.0	0.0

Protein Annotations

Gene3D:1.10.390.10	Gene3D:3.20.20.210	MapMan:35.1	UniProt:A0A1D6EU68	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008237	GO:GO:0008270
GO:GO:0016787	GO:GO:0019538	InterPro:IPR027268	InterPro:IPR038071	ProteinID:ONM23214.1	PFAM:PF01433
PANTHER:PTHR11533	PANTHER:PTHR11533:SF174	InterPro:Peptidase_M1	InterPro:Peptidase_M1_N	InterPro:Peptidase_M4/M1_CTD_sf	SUPFAM:SSF55486
UniParc:UPI000844BF69	InterPro:UROD/MetE-like_sf	EnsemblPlantsGene:Zm00001d006253	EnsemblPlants:Zm00001d006253_P001	EnsemblPlants:Zm00001d006253_T001	SEG:seg

Description

Leukotriene A-4 hydrolase homolog

Coordinates

chr2:-:202862887..202866451

Molecular Weight (calculated)

40617.5 Da

IEP (calculated)

6.391

GRAVY (calculated)

-0.206

Length

360 amino acids

Sequence
(BLAST)

001: MGIGWRGLNR MMERFKDNME FTKLKPKMAG IDPDDVYSEV PYEKGFQILW RIEREIGRPT FDEFLKKYIA TFKFQSIDTE TFLEFLKTNV PGIENKIDLH
101: LWVEGTGIPP DAMEPDSATY KKICSLAAEF KSGKLPSEDE VAKWSGQEWE LYIENLPADV EASQISSVLL HMTIVIDKIL EKGTVEYLIV HTTILEYFTI
201: ADKTSASDAI CQLIPLLTQG ALIIDGDEPT NAPELPKKAK AKKKRSKEPL IVRIMQTREG LKLGISCLKY GSAKMIVKIV VVCNDAIIGH SEHQYVATGM
301: PTKAALKLWS RKCISAKETI MEEASPETVE EPLLVSAIRG KKVERAPIWL MRQAESASRF

Best Arabidopsis Sequence Match ( AT5G13520.1 )
(BLAST)

001: MAPIDPHSFT DSSHPLTTHV ALSLYLDFNT SIIHGSALLT LSSAFSGELS LDTRCISIAM VLDPLTLEPI PYSVSTTPDR IRGTEVVVVL SGQSSLLIVY
101: STSPSASALQ WLSPLQTFSK LHPYVYTQCQ AIHARSIFPC QDTPAARIRY DVVMNIPNSL SAVMSARHVR RRLAVPEEAK HLEAGSLGSS LWCGEDRVVE
201: EFAMEQPIPP YLFAFAVGEL GFREVGPRTR VYTESAAIEV LDAAALEFAG TEDMIKQGEK LFGDYEWERF DLLVLPPSFP YGGMENPRMV FLTPTVIKGD
301: ATGAQVVAHE LAHSWTGNLI TNINNEHFWL NEGFTTYAER RIVEVVQGAD IATLNIGIGW RGLTDEMERF KDNLECTKLW NKQEGVDPDD VYSQVPYEKG
401: FQFVLRIERQ IGRTAFDEFL KKYIATFKFK SIDTNTFLEF LKANIPGIEK EINLQLWTEG VGIPEDAYEP VSTIYTKIIS LAKEFKEGKM PSEDDVAEWN
501: GQEWELYLEN LPKSCEPSQV MALDKRYRLA ESKDYEVKVS FLQLAVTSKC REYHGEVKKT LKEVGRMKYL RPLFTALAQS GGTEEKQLAK QVFAEARETY
601: HPIAQGVVES ILSKYI

Arabidopsis Description

LKHA4Leukotriene A-4 hydrolase homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9FY49]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.