Factsheet for Zm00001d042539_P001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 2
cytosol 1
extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, plastid, secretory
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034630_P001	Maize	extracellular	10.53	2.29
Zm00001d032282_P012	Maize	plasma membrane	3.76	0.57
KRH52220	Soybean	mitochondrion	0.75	0.47
Zm00001d016373_P003	Maize	plastid	3.01	0.46
Zm00001d020225_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	2.26	0.32
Zm00001d018463_P001	Maize	peroxisome	0.75	0.28
Zm00001d006252_P001	Maize	peroxisome	0.75	0.28
Zm00001d012310_P001	Maize	cytosol	0.0	0.0
Zm00001d017093_P001	Maize	cytosol	0.0	0.0
CDY65639	Canola	cytosol	0.0	0.0
Zm00001d018547_P001	Maize	cytosol	0.0	0.0
Zm00001d011075_P060	Maize	mitochondrion	0.0	0.0
Zm00001d006253_P001	Maize	peroxisome	0.0	0.0
Zm00001d036958_P001	Maize	cytosol	0.0	0.0
Zm00001d044280_P001	Maize	peroxisome	0.0	0.0
Zm00001d047903_P001	Maize	cytosol	0.0	0.0
Zm00001d053711_P001	Maize	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d042539_P001	EnsemblPlants:Zm00001d042539_T001	EnsemblPlantsGene:Zm00001d042539	Gene3D:2.60.40.1730	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	ProteinID:ONM35722.1	SEG:seg	UniParc:UPI000843550B	UniProt:A0A1D6N514	MapMan:35.1

Description

Leukotriene A-4 hydrolase homolog

Coordinates

chr3:-:171243899..171244513

Molecular Weight (calculated)

13790.3 Da

IEP (calculated)

8.293

GRAVY (calculated)

0.156

Length

133 amino acids

Sequence
(BLAST)

001: MHPVVSCTAL TFYLDFAAST IHASAVLTLS APHSGDLLLD TCALAVHSAS THADPPEPIL FSLGTALTLA LPHDTASFRL TFSTSPAASA LQWLARHRPP
101: PRSPLSSRSA IPSTLAPSSP ATTPTPRASP SRS

Best Arabidopsis Sequence Match ( AT5G13520.1 )
(BLAST)

001: MAPIDPHSFT DSSHPLTTHV ALSLYLDFNT SIIHGSALLT LSSAFSGELS LDTRCISIAM VLDPLTLEPI PYSVSTTPDR IRGTEVVVVL SGQSSLLIVY
101: STSPSASALQ WLSPLQTFSK LHPYVYTQCQ AIHARSIFPC QDTPAARIRY DVVMNIPNSL SAVMSARHVR RRLAVPEEAK HLEAGSLGSS LWCGEDRVVE
201: EFAMEQPIPP YLFAFAVGEL GFREVGPRTR VYTESAAIEV LDAAALEFAG TEDMIKQGEK LFGDYEWERF DLLVLPPSFP YGGMENPRMV FLTPTVIKGD
301: ATGAQVVAHE LAHSWTGNLI TNINNEHFWL NEGFTTYAER RIVEVVQGAD IATLNIGIGW RGLTDEMERF KDNLECTKLW NKQEGVDPDD VYSQVPYEKG
401: FQFVLRIERQ IGRTAFDEFL KKYIATFKFK SIDTNTFLEF LKANIPGIEK EINLQLWTEG VGIPEDAYEP VSTIYTKIIS LAKEFKEGKM PSEDDVAEWN
501: GQEWELYLEN LPKSCEPSQV MALDKRYRLA ESKDYEVKVS FLQLAVTSKC REYHGEVKKT LKEVGRMKYL RPLFTALAQS GGTEEKQLAK QVFAEARETY
601: HPIAQGVVES ILSKYI

Arabidopsis Description

LKHA4Leukotriene A-4 hydrolase homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9FY49]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.