Factsheet for Zm00001d034630_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93198	Sorghum	cytosol	96.73	96.73
HORVU5Hr1G112530.1	Barley	extracellular	61.87	91.75
HORVU0Hr1G014070.1	Barley	cytosol, plasma membrane, plastid	81.67	90.56
TraesCS5A01G474300.1	Wheat	cytosol	89.03	88.74
TraesCS5D01G487100.1	Wheat	cytosol	84.78	84.5
TraesCS5B01G487400.1	Wheat	cytosol	84.78	84.23
CDX91114	Canola	cytosol	40.26	71.3
GSMUA_Achr4P16860_001	Banana	cytosol	63.99	70.96
KRG93029	Soybean	nucleus	69.39	69.51
VIT_13s0067g03300.t01	Wine grape	cytosol	69.23	69.23
Solyc04g049720.2.1	Tomato	cytosol	58.76	65.99
Bra008823.1-P	Field mustard	cytosol	66.12	65.8
CDX69635	Canola	cytosol	66.12	65.8
Bra023419.1-P	Field mustard	cytosol	65.79	65.69
CDX85643	Canola	cytosol	65.63	65.52
CDY09805	Canola	cytosol	65.63	65.31
PGSC0003DMT400074587	Potato	cytosol	65.14	65.03
AT5G13520.1	Thale cress	cytosol	62.52	62.01
Zm00001d017093_P001	Maize	cytosol	26.68	45.53
Zm00001d018463_P001	Maize	peroxisome	26.51	45.0
Zm00001d006253_P001	Maize	peroxisome	26.35	44.72
Zm00001d044280_P001	Maize	peroxisome	26.35	44.72
Zm00001d006252_P001	Maize	peroxisome	26.19	44.44
Zm00001d047903_P001	Maize	cytosol	3.6	24.44
Zm00001d053711_P001	Maize	cytosol	3.44	23.33
Zm00001d018547_P001	Maize	cytosol	3.93	23.08
Zm00001d012310_P001	Maize	cytosol	4.75	21.8
Zm00001d036958_P001	Maize	cytosol	4.91	20.41
Zm00001d032282_P012	Maize	plasma membrane	16.37	11.42
Zm00001d016373_P003	Maize	plastid	16.37	11.38
Zm00001d042539_P001	Maize	vacuole	2.29	10.53
Zm00001d020225_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	15.71	10.37
Zm00001d011075_P060	Maize	mitochondrion	5.56	5.84

Protein Annotations

KEGG:00590+3.3.2.6	Gene3D:1.10.1740.60	Gene3D:1.10.390.10	Gene3D:1.25.40.320	MapMan:19.4.5.6.5	Gene3D:2.60.40.1730
InterPro:ARM-type_fold	EMBL:BT063516	EMBL:BT067395	UniProt:C0P5E7	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008237	GO:GO:0008270
GO:GO:0016787	GO:GO:0019538	InterPro:IPR027268	InterPro:IPR038502	MEROPS:M01.A26	InterPro:M1_LTA-4_hydro/amino_C_sf
InterPro:M1_LTA4H	ProteinID:ONM10838.1	PFAM:PF01433	PFAM:PF09127	PRINTS:PR00756	PANTHER:PTHR11533
PANTHER:PTHR11533:SF174	InterPro:Peptidase_M1	InterPro:Peptidase_M1_C	InterPro:Peptidase_M1_N	InterPro:Peptidase_M4/M1_CTD_sf	SMART:SM01263
SUPFAM:SSF48371	SUPFAM:SSF55486	SUPFAM:SSF63737	UniParc:UPI00019490A4	EnsemblPlantsGene:Zm00001d034630	EnsemblPlants:Zm00001d034630_P001
EnsemblPlants:Zm00001d034630_T001	SEG:seg	:	:	:	:

Description

Leukotriene A-4 hydrolase homolog

Coordinates

chr1:+:298527321..298536055

Molecular Weight (calculated)

67773.4 Da

IEP (calculated)

4.876

GRAVY (calculated)

-0.184

Length

611 amino acids

Sequence
(BLAST)

001: MAPVDPHSYT DGAHPVVSRA ALAFYLDFAA STIHASAVLT LSAPHSGDLL LDTRALAVHS ASTDADPPEP IPFSLAAAPD PVLGTALTLA LPRDTASFRL
101: TFSTSPAASA LQWLAPPQTA SAQPFVFSQC QSIHARSVFP CHDTPAARIT FSLLLNVPEQ LSAVAAARHV ARRDPLPSDH RGACDDGLWC APGRIVEEFQ
201: MDQSVPPYLF AFAAGSIGFR DLGPRTRVYA EGGDTVLDEA AREFAGVEEM VKVGEGLFGP YEWERFDLLV LPPSFPYGGM ENPRMVFLTP TVIKGDAAGA
301: QVVAHELAHS WTGNLITNKT NEDFWLNEGF TTYAERRIVE VVQGEERAAL NMGIGWRGLN RMMERFKDNM EFTKLKPKMA GIDPDDVYSE VPYEKGFQFL
401: WRIEREIGRP AFDEFLKKYI ATFKFQSIDT ETFLEFLKTN VPGIENKIDL HLWVEGTGIP PDAMEPDSAT YKKICSLAAE FKSGKLPSED EVAKWSGQEW
501: ELYLENLPAD VEASQVTALD ERYKLSESRD YEVKVAFLQL AIPTGCKCYF NEVEKCLKQV GRMKYLRPLY SSLAKCSSEE KMLAQRIFSE AQEFYHPIAR
601: SVAEAILSKH S

Best Arabidopsis Sequence Match ( AT5G13520.1 )
(BLAST)

001: MAPIDPHSFT DSSHPLTTHV ALSLYLDFNT SIIHGSALLT LSSAFSGELS LDTRCISIAM VLDPLTLEPI PYSVSTTPDR IRGTEVVVVL SGQSSLLIVY
101: STSPSASALQ WLSPLQTFSK LHPYVYTQCQ AIHARSIFPC QDTPAARIRY DVVMNIPNSL SAVMSARHVR RRLAVPEEAK HLEAGSLGSS LWCGEDRVVE
201: EFAMEQPIPP YLFAFAVGEL GFREVGPRTR VYTESAAIEV LDAAALEFAG TEDMIKQGEK LFGDYEWERF DLLVLPPSFP YGGMENPRMV FLTPTVIKGD
301: ATGAQVVAHE LAHSWTGNLI TNINNEHFWL NEGFTTYAER RIVEVVQGAD IATLNIGIGW RGLTDEMERF KDNLECTKLW NKQEGVDPDD VYSQVPYEKG
401: FQFVLRIERQ IGRTAFDEFL KKYIATFKFK SIDTNTFLEF LKANIPGIEK EINLQLWTEG VGIPEDAYEP VSTIYTKIIS LAKEFKEGKM PSEDDVAEWN
501: GQEWELYLEN LPKSCEPSQV MALDKRYRLA ESKDYEVKVS FLQLAVTSKC REYHGEVKKT LKEVGRMKYL RPLFTALAQS GGTEEKQLAK QVFAEARETY
601: HPIAQGVVES ILSKYI

Arabidopsis Description

LKHA4Leukotriene A-4 hydrolase homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9FY49]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.