Factsheet for Zm00001d016373_P003

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
mitochondrion 2
endoplasmic reticulum 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

plastid: 23198870

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018547_P001	Maize	cytosol	11.15	94.23
EES04750	Sorghum	cytosol	92.83	92.62
Zm00001d047903_P001	Maize	cytosol	9.1	88.89
Zm00001d053711_P001	Maize	cytosol	8.99	87.78
TraesCS6B01G213700.1	Wheat	golgi	85.44	85.63
HORVU6Hr1G039140.3	Barley	cytosol	85.1	85.1
Os02t0218200-01	Rice	plasma membrane, plastid	84.87	84.97
TraesCS6D01G171800.1	Wheat	golgi, unclear	84.76	84.95
TraesCS6A01G182500.1	Wheat	golgi, unclear	84.76	84.47
Zm00001d012310_P001	Maize	cytosol	11.38	75.19
Zm00001d036958_P001	Maize	cytosol	11.72	70.07
Zm00001d032282_P012	Maize	plasma membrane	59.04	59.25
Zm00001d020225_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	55.06	52.27
Zm00001d034630_P001	Maize	extracellular	11.38	16.37
Zm00001d011075_P060	Maize	mitochondrion	6.48	9.79
Zm00001d017093_P001	Maize	cytosol	2.96	7.26
Zm00001d006252_P001	Maize	peroxisome	2.96	7.22
Zm00001d006253_P001	Maize	peroxisome	2.96	7.22
Zm00001d018463_P001	Maize	peroxisome	2.96	7.22
Zm00001d044280_P001	Maize	peroxisome	2.84	6.94
Zm00001d042539_P001	Maize	vacuole	0.46	3.01

Protein Annotations

Gene3D:1.10.390.60	Gene3D:1.25.50.20	MapMan:19.4.5.6.5	Gene3D:2.60.40.1730	Gene3D:2.60.40.1910	UniProt:A0A1D6H703
ProteinID:AQK70569.1	InterPro:ERAP1-like_C_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004177	GO:GO:0005488
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008237	GO:GO:0008270
GO:GO:0016787	GO:GO:0019538	GO:GO:0046872	InterPro:M1_APN-typ	PFAM:PF01433	PFAM:PF11838
PRINTS:PR00756	PANTHER:PTHR11533	PANTHER:PTHR11533:SF183	InterPro:Peptidase_M1	InterPro:Peptidase_M1_N	SUPFAM:SSF55486
SUPFAM:SSF63737	UniParc:UPI000843A3C0	EnsemblPlantsGene:Zm00001d016373	EnsemblPlants:Zm00001d016373_P003	EnsemblPlants:Zm00001d016373_T003	SEG:seg

Description

Aminopeptidase M1

Coordinates

chr5:-:159727360..159736719

Molecular Weight (calculated)

98890.2 Da

IEP (calculated)

5.333

GRAVY (calculated)

-0.083

Length

879 amino acids

Sequence
(BLAST)

001: MAAEQTAEQF RGQARLPHFA SPRRYDLRLT PDLPACVFTG SVAVSIGVAA PTRFLVLNAA ELDVATGGVS FAPQGSDQVL QPLEVTNVPE DEILIIRFNE
101: VLSIGEGTLT IAFKGTLNDK MHGFYRSVYE LNGEKKNMAV TQFEPADARR CFPCWDEPAF KAVFKITLEV PSETIALSNM PVIEEKVNGP TKIVYFQESR
201: IMSTYLVAVI VGNFDYVEDF TTDGTRVRVY TQVGKSAQGR FALEVALKTL VLFKEYFAVP YPLPKMDMVA IPDFAAGAME NYGLVTYRET ALLFDEMHSA
301: AANKQRVAVV VAHELAHQWF GNLVTMEWWT HLWLNEGFAT WVSYLAADQF FPEWNVWTQF LEESTVGFKL DALAGSHPIE VDINHVDEID EIFDAISYRK
401: GASVIRMLQN YLGAEVFQNS LAAYIKRFAY SNAKTEDLWA ALEEGSGEPV RTLMHSWTKQ QGYPVINVKL KDGKFQLEQT QFLSSGSTGV GQWVVPITLC
501: CCSYSRQAKF LFHGKQEDFD LSASGFTDCQ KKDGFWIKLN VNQTSFYRVS YDEELAARLR YAIETNKLGA ADRYGVLDDA YALCMAGKQK LVSLLHLISV
601: YKDETEYTVL AHIITTSLHI AEMMVIAAPE ELVHLKKFLI DFLEPFALKL GWDAKSDEGH LNALLRGTLL TALAELGHEA TINEAVRRFN VFLEDRETPL
701: LPPDVRKAAY VALMQTVSKS NKTGYESLLR IYRETDLSQE KVRVLGSLAS SPDHDVVREV LNFILSPEVR NQDAIFLLRG VSSGAHEVAW QWLKENWDYI
801: LGAYSGTLLT YFVNITVSPL ATDEHGDEAE EFFKSRTKAN IARTVRQSIE RVRINAQWVK NIKAEADLGN VLKKLAYKH

Best Arabidopsis Sequence Match ( AT4G33090.1 )
(BLAST)

001: MDQFKGEPRL PKFAVPKRYD LRLNPDLIAC TFTGTVAIDL DIVADTRFIV LNAADLSVND ASVSFTPPSS SKALAAPKVV LFEEDEILVL EFGEILPHGV
101: GVLKLGFNGV LNDKMKGFYR STYEHNGEKK NMAVTQFEPA DARRCFPCWD EPACKATFKI TLEVPTDLVA LSNMPIMEEK VNGNLKIVSY QESPIMSTYL
201: VAIVVGLFDY VEDHTSDGIK VRVYCQVGKA DQGKFALHVG AKTLDLFKEY FAVPYPLPKM DMIAIPDFAA GAMENYGLVT YRETALLYDE QHSAASNKQR
301: VATVVAHELA HQWFGNLVTM EWWTHLWLNE GFATWVSYLA TDSLFPEWKI WTQFLDESTE GLRLDGLEES HPIEVEVNHA AEIDEIFDAI SYRKGASVIR
401: MLQSYLGAEV FQKSLAAYIK NHAYSNAKTE DLWAALEAGS GEPVNKLMSS WTKQKGYPVV SAKIKDGKLE LEQSRFLSSG SPGEGQWIVP VTLCCGSYEK
501: RKNFLLESKS GAYDLKELLG CSIADGSDKI NGTCSWIKIN VDQAGFYRVK YDDSLAAGLR NATESQSLTS IDRYGILDDS FALTMARQQS LASLLTLCSA
601: YKKELDYTVL SNLIAISYKV VKIGADANQE LMSGIKHFFI GVFQFAAGKL GWDPKQGESH LDAMLRGEVL TALAVFGHDE TLKEAVRRFD AFLADRNTPL
701: LPPDIRRAAY VAVMQRANKS DKSGYESLLR VYRETDLSQE KTRILGSLAS CPDPTIVQDV LNFVLSDEVR NQDALYGLSG VSWEGREVAW KWLQEKWEYI
801: GNTWGSGFLI TRFISAVVSP FASFEKAKEV EEFFATRSKP SMARTLKQSI ERVHINANWV ESIKKEDNLT QLVAQLSSN

Arabidopsis Description

APM1Aminopeptidase [Source:UniProtKB/TrEMBL;Acc:A0A178UWR6]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.