Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
25769308
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G171800.1 | Wheat | golgi, unclear | 99.2 | 99.2 |
| HORVU6Hr1G039140.3 | Barley | cytosol | 98.29 | 98.07 |
| TraesCS6A01G182500.1 | Wheat | golgi, unclear | 98.4 | 97.85 |
| Zm00001d018547_P001 | Maize | cytosol | 10.72 | 90.38 |
| Os02t0218200-01 | Rice | plasma membrane, plastid | 87.57 | 87.47 |
| EES04750 | Sorghum | cytosol | 86.89 | 86.49 |
| Zm00001d016373_P003 | Maize | plastid | 85.63 | 85.44 |
| Zm00001d047903_P001 | Maize | cytosol | 8.67 | 84.44 |
| Zm00001d053711_P001 | Maize | cytosol | 8.67 | 84.44 |
| Zm00001d012310_P001 | Maize | cytosol | 10.95 | 72.18 |
| Zm00001d036958_P001 | Maize | cytosol | 11.4 | 68.03 |
| TraesCS4B01G020000.1 | Wheat | plastid | 61.69 | 59.71 |
| TraesCS5B01G189500.1 | Wheat | plasma membrane | 56.44 | 53.57 |
| TraesCS5B01G189600.1 | Wheat | extracellular, plasma membrane | 56.21 | 53.3 |
| TraesCS5B01G076900.2 | Wheat | cytosol, mitochondrion, plasma membrane, plastid | 29.99 | 52.92 |
| TraesCS5B01G487400.1 | Wheat | cytosol | 10.95 | 15.61 |
Protein Annotations
| Gene3D:1.10.390.60 | Gene3D:1.25.50.20 | MapMan:19.4.5.6.5 | Gene3D:2.60.40.1730 | Gene3D:2.60.40.1910 | InterPro:ERAP1-like_C_dom |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008237 | GO:GO:0008270 | GO:GO:0016787 | GO:GO:0019538 | InterPro:M1_APN-typ | PFAM:PF01433 |
| PFAM:PF11838 | PRINTS:PR00756 | PANTHER:PTHR11533 | PANTHER:PTHR11533:SF183 | InterPro:Peptidase_M1 | InterPro:Peptidase_M1_N |
| SUPFAM:SSF55486 | SUPFAM:SSF63737 | EnsemblPlantsGene:TraesCS6B01G213700 | EnsemblPlants:TraesCS6B01G213700.1 | TIGR:cd09601 | SEG:seg |
Description
No Description!
Coordinates
chr6B:-:288648462..288656985
Molecular Weight (calculated)
98212.5 Da
IEP (calculated)
5.282
GRAVY (calculated)
-0.069
Length
877 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEQSAEHF RGQARLPGFA APRRYDLRLT PDLAACTFAG SVSVSVDVAA PTRFLVLNAA DLDVAPGDVH FAPKGSGQVL LPVEVTSALE DEILIIRFNE
101: VLPLGEGTLV IAFQGTLNDK MKGFYRSVYE LNGEKKNMAV TQFEPADARR CFPCWDEPSF KAVFKITLEV PSETVALSNM PVVEEKVNGP TKIVYFQESP
201: IMSTYLVAVI VGMFDYVEAF TADGTSVRVY TQVGKSAQGK FALEVAVKTL ILFKEYFAVP YPLPKMDMIA IPDFASGAME NYGLVTYRET ALLFDERHSA
301: AANKQRVAVV VAHELAHQWF GNLVTMEWWT HLWLNEGFAT WVSYLAADRF FPEWNVWIQF LEESTTGFRL DALAGSHPIE VDVNHVDEID EIFDAISYRK
401: GAAVIRMLQS YLGAEIFQKS LAAYIKRFAY SNAKTEDLWA ALEEGSGEPV KTLMHSWTKQ QGYPVVSVKL KDGKLELEQT QFLSSGSEGV GQWVVPITLC
501: CCSYSVQQKF LFRGKQEDFN LSGLVECQKK DDFWIKLNVD QTGFYRVSYD EELASRLRHA VETNILSAAD RYGVLDDTYA LCMAGKQKLV TLLHLIAAYK
601: NETEYTVLAH AINTSLSIYE MMAVAAPEEL VNMKKFLIDF LEPFAQRVGW DAKSGEGHLN ALLRGTLLSA LAELGHQSTI DEAVRRFNVF LEDRETPLLP
701: PDVRKAAYVA LMQTVNKSNK SGYESLLKIY RETDLSQEKV RVLGSLASSP DPDVVREALN FLLSSEVRNQ DCIFVLRGVT AAAHEVAWTW LKENWDYIAE
801: TFTGHLLTYF ITVTVSPLAT DEKGDEAEEF FKSRTKASIA RTVKQSIERV RIKAKWVKST KGEADLGNVL KQLAHKH
101: VLPLGEGTLV IAFQGTLNDK MKGFYRSVYE LNGEKKNMAV TQFEPADARR CFPCWDEPSF KAVFKITLEV PSETVALSNM PVVEEKVNGP TKIVYFQESP
201: IMSTYLVAVI VGMFDYVEAF TADGTSVRVY TQVGKSAQGK FALEVAVKTL ILFKEYFAVP YPLPKMDMIA IPDFASGAME NYGLVTYRET ALLFDERHSA
301: AANKQRVAVV VAHELAHQWF GNLVTMEWWT HLWLNEGFAT WVSYLAADRF FPEWNVWIQF LEESTTGFRL DALAGSHPIE VDVNHVDEID EIFDAISYRK
401: GAAVIRMLQS YLGAEIFQKS LAAYIKRFAY SNAKTEDLWA ALEEGSGEPV KTLMHSWTKQ QGYPVVSVKL KDGKLELEQT QFLSSGSEGV GQWVVPITLC
501: CCSYSVQQKF LFRGKQEDFN LSGLVECQKK DDFWIKLNVD QTGFYRVSYD EELASRLRHA VETNILSAAD RYGVLDDTYA LCMAGKQKLV TLLHLIAAYK
601: NETEYTVLAH AINTSLSIYE MMAVAAPEEL VNMKKFLIDF LEPFAQRVGW DAKSGEGHLN ALLRGTLLSA LAELGHQSTI DEAVRRFNVF LEDRETPLLP
701: PDVRKAAYVA LMQTVNKSNK SGYESLLKIY RETDLSQEKV RVLGSLASSP DPDVVREALN FLLSSEVRNQ DCIFVLRGVT AAAHEVAWTW LKENWDYIAE
801: TFTGHLLTYF ITVTVSPLAT DEKGDEAEEF FKSRTKASIA RTVKQSIERV RIKAKWVKST KGEADLGNVL KQLAHKH
001: MDQFKGEPRL PKFAVPKRYD LRLNPDLIAC TFTGTVAIDL DIVADTRFIV LNAADLSVND ASVSFTPPSS SKALAAPKVV LFEEDEILVL EFGEILPHGV
101: GVLKLGFNGV LNDKMKGFYR STYEHNGEKK NMAVTQFEPA DARRCFPCWD EPACKATFKI TLEVPTDLVA LSNMPIMEEK VNGNLKIVSY QESPIMSTYL
201: VAIVVGLFDY VEDHTSDGIK VRVYCQVGKA DQGKFALHVG AKTLDLFKEY FAVPYPLPKM DMIAIPDFAA GAMENYGLVT YRETALLYDE QHSAASNKQR
301: VATVVAHELA HQWFGNLVTM EWWTHLWLNE GFATWVSYLA TDSLFPEWKI WTQFLDESTE GLRLDGLEES HPIEVEVNHA AEIDEIFDAI SYRKGASVIR
401: MLQSYLGAEV FQKSLAAYIK NHAYSNAKTE DLWAALEAGS GEPVNKLMSS WTKQKGYPVV SAKIKDGKLE LEQSRFLSSG SPGEGQWIVP VTLCCGSYEK
501: RKNFLLESKS GAYDLKELLG CSIADGSDKI NGTCSWIKIN VDQAGFYRVK YDDSLAAGLR NATESQSLTS IDRYGILDDS FALTMARQQS LASLLTLCSA
601: YKKELDYTVL SNLIAISYKV VKIGADANQE LMSGIKHFFI GVFQFAAGKL GWDPKQGESH LDAMLRGEVL TALAVFGHDE TLKEAVRRFD AFLADRNTPL
701: LPPDIRRAAY VAVMQRANKS DKSGYESLLR VYRETDLSQE KTRILGSLAS CPDPTIVQDV LNFVLSDEVR NQDALYGLSG VSWEGREVAW KWLQEKWEYI
801: GNTWGSGFLI TRFISAVVSP FASFEKAKEV EEFFATRSKP SMARTLKQSI ERVHINANWV ESIKKEDNLT QLVAQLSSN
101: GVLKLGFNGV LNDKMKGFYR STYEHNGEKK NMAVTQFEPA DARRCFPCWD EPACKATFKI TLEVPTDLVA LSNMPIMEEK VNGNLKIVSY QESPIMSTYL
201: VAIVVGLFDY VEDHTSDGIK VRVYCQVGKA DQGKFALHVG AKTLDLFKEY FAVPYPLPKM DMIAIPDFAA GAMENYGLVT YRETALLYDE QHSAASNKQR
301: VATVVAHELA HQWFGNLVTM EWWTHLWLNE GFATWVSYLA TDSLFPEWKI WTQFLDESTE GLRLDGLEES HPIEVEVNHA AEIDEIFDAI SYRKGASVIR
401: MLQSYLGAEV FQKSLAAYIK NHAYSNAKTE DLWAALEAGS GEPVNKLMSS WTKQKGYPVV SAKIKDGKLE LEQSRFLSSG SPGEGQWIVP VTLCCGSYEK
501: RKNFLLESKS GAYDLKELLG CSIADGSDKI NGTCSWIKIN VDQAGFYRVK YDDSLAAGLR NATESQSLTS IDRYGILDDS FALTMARQQS LASLLTLCSA
601: YKKELDYTVL SNLIAISYKV VKIGADANQE LMSGIKHFFI GVFQFAAGKL GWDPKQGESH LDAMLRGEVL TALAVFGHDE TLKEAVRRFD AFLADRNTPL
701: LPPDIRRAAY VAVMQRANKS DKSGYESLLR VYRETDLSQE KTRILGSLAS CPDPTIVQDV LNFVLSDEVR NQDALYGLSG VSWEGREVAW KWLQEKWEYI
801: GNTWGSGFLI TRFISAVVSP FASFEKAKEV EEFFATRSKP SMARTLKQSI ERVHINANWV ESIKKEDNLT QLVAQLSSN
Arabidopsis Description
APM1Aminopeptidase [Source:UniProtKB/TrEMBL;Acc:A0A178UWR6]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.