Factsheet for Os02t0218200-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

nucleus 2
cytosol 5
extracellular 1
mitochondrion 3
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018547_P001	Maize	cytosol	10.93	92.31
HORVU6Hr1G039140.3	Barley	cytosol	87.7	87.6
TraesCS6B01G213700.1	Wheat	golgi	87.47	87.57
TraesCS6D01G171800.1	Wheat	golgi, unclear	87.36	87.46
TraesCS6A01G182500.1	Wheat	golgi, unclear	87.36	86.96
Zm00001d047903_P001	Maize	cytosol	8.88	86.67
Zm00001d053711_P001	Maize	cytosol	8.88	86.67
EES04750	Sorghum	cytosol	85.42	85.13
Zm00001d016373_P003	Maize	plastid	84.97	84.87
Zm00001d012310_P001	Maize	cytosol	11.16	73.68
Zm00001d036958_P001	Maize	cytosol	11.39	68.03
Os08t0398700-01	Rice	plasma membrane	61.96	62.17
Os09t0362500-01	Rice	plasma membrane	58.31	58.85
Os09t0362800-02	Rice	cytosol	19.48	43.85
Os03t0819100-01	Rice	cytosol, plasma membrane, plastid	11.05	15.88

Protein Annotations

Gene3D:1.10.390.60	Gene3D:1.25.50.20	MapMan:19.4.5.6.5	Gene3D:2.60.40.1730	Gene3D:2.60.40.1910	EntrezGene:4328737
EMBL:AK066996	ProteinID:BAD17179.1	ProteinID:BAF08217.1	ProteinID:BAS77671.1	ProteinID:EAZ22251.1	InterPro:ERAP1-like_C_dom
GO:GO:0003674	GO:GO:0003676	GO:GO:0003824	GO:GO:0004177	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0008237	GO:GO:0008270	GO:GO:0009056	GO:GO:0009987
GO:GO:0016020	GO:GO:0016787	GO:GO:0019538	GO:GO:0031090	GO:GO:0042277	GO:GO:0043171
GO:GO:0043231	GO:GO:0046872	GO:GO:0070006	MEROPS:M01.A25	InterPro:M1_APN-typ	EnsemblPlantsGene:Os02g0218200
EnsemblPlants:Os02t0218200-01	PFAM:PF01433	PFAM:PF11838	PRINTS:PR00756	PANTHER:PTHR11533	PANTHER:PTHR11533:SF183
InterPro:Peptidase_M1	InterPro:Peptidase_M1_N	UniProt:Q6Z6L4	SUPFAM:SSF55486	SUPFAM:SSF63737	UniParc:UPI000035AE2C
RefSeq:XP_015626085.1	SEG:seg	:	:	:	:

Description

Peptidase M1, membrane alanine aminopeptidase family protein. (Os02t0218200-01);Similar to APM1 (AMINOPEPTIDASE M1). (Os02t0218200-02)

Coordinates

chr2:+:6599225..6606516

Molecular Weight (calculated)

98458.4 Da

IEP (calculated)

4.843

GRAVY (calculated)

-0.129

Length

878 amino acids

Sequence
(BLAST)

001: MAAAEQSAEQ FRGQARLPGF AAPRRYDLRL VPDLDGCAFT GSVDVSVDVT APTRFLVLNA AELEVSPGGV QFKPHGAEQE LHPAEVTNVP EDEILIIRFN
101: EVLPVGEGTL VIAFKGTLND KMHGFYRSVY ELNGEKKNMA VTQFEPADAR RCFPCWDEPS FKAIFKITLE VPSETVALSN MPVVEEKVNG LIKAVYFQET
201: PIMSTYLVAV IVGMFDYVEA FTTDGTRVRV YTQVGKSAQG KFALEVAVKT LVLFKEYFAV PYPLPKMDMI AIPDFASGAM ENYGLVTYRE TALLFDEKHS
301: AAANKQRVAV VVAHELAHQW FGNLVTMEWW THLWLNEGFA TWVSYLAADN FFPEWNVWTQ FLEESTTGFK LDALAGSHPI EVDVNHVDEI DEIFDAISYR
401: KGAAVIRMLQ SYLGAETFQK SLAAYIEKFA YSNAKTEDLW AALEEGSGEP VKTLMHSWTK QQGYPVVNVK LKDGKLEMEQ TQFLSSGAEG VGQWVVPITL
501: CCCSYSRQEK FLFNGKQEDF NLSGLVECQK KEDFWIKLNV NQTGFYRVSY DEELASRLRY AIEANKLSAA DRYGVLDDTY ALCMAGKQKL VSLLHLIAAY
601: KDETEYTVLA RVIDTSLSIV EMVAVAAPEG LGKLKKFLID FLEPFAQRIG WDAKSGEGHL DALLRGTLLT ALAELGHEAT INEAVRRFNI FVEDRETPLL
701: PPDVRKAAYV ALMQTVNKSN RAGYESLLKI YKETDLSQEK VRILGSLASC PDPDVVRDTL DFMLSPEVRN QDSIFLLRGV GAAGHEVAWT WLKEKWDYIS
801: DTFSGTLLTY FVSTTVSPLR TDEMGDDAEE FFKSRTKANI ARTVKQSIER VRINAKWVES TRAEANLGNV LKEISHDH

Best Arabidopsis Sequence Match ( AT4G33090.1 )
(BLAST)

001: MDQFKGEPRL PKFAVPKRYD LRLNPDLIAC TFTGTVAIDL DIVADTRFIV LNAADLSVND ASVSFTPPSS SKALAAPKVV LFEEDEILVL EFGEILPHGV
101: GVLKLGFNGV LNDKMKGFYR STYEHNGEKK NMAVTQFEPA DARRCFPCWD EPACKATFKI TLEVPTDLVA LSNMPIMEEK VNGNLKIVSY QESPIMSTYL
201: VAIVVGLFDY VEDHTSDGIK VRVYCQVGKA DQGKFALHVG AKTLDLFKEY FAVPYPLPKM DMIAIPDFAA GAMENYGLVT YRETALLYDE QHSAASNKQR
301: VATVVAHELA HQWFGNLVTM EWWTHLWLNE GFATWVSYLA TDSLFPEWKI WTQFLDESTE GLRLDGLEES HPIEVEVNHA AEIDEIFDAI SYRKGASVIR
401: MLQSYLGAEV FQKSLAAYIK NHAYSNAKTE DLWAALEAGS GEPVNKLMSS WTKQKGYPVV SAKIKDGKLE LEQSRFLSSG SPGEGQWIVP VTLCCGSYEK
501: RKNFLLESKS GAYDLKELLG CSIADGSDKI NGTCSWIKIN VDQAGFYRVK YDDSLAAGLR NATESQSLTS IDRYGILDDS FALTMARQQS LASLLTLCSA
601: YKKELDYTVL SNLIAISYKV VKIGADANQE LMSGIKHFFI GVFQFAAGKL GWDPKQGESH LDAMLRGEVL TALAVFGHDE TLKEAVRRFD AFLADRNTPL
701: LPPDIRRAAY VAVMQRANKS DKSGYESLLR VYRETDLSQE KTRILGSLAS CPDPTIVQDV LNFVLSDEVR NQDALYGLSG VSWEGREVAW KWLQEKWEYI
801: GNTWGSGFLI TRFISAVVSP FASFEKAKEV EEFFATRSKP SMARTLKQSI ERVHINANWV ESIKKEDNLT QLVAQLSSN

Arabidopsis Description

APM1Aminopeptidase [Source:UniProtKB/TrEMBL;Acc:A0A178UWR6]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.