Subcellular Localization
min:
: max
Winner_takes_all: golgi, unclear
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| golgi:
25769308
unclear: 25769308 |
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G213700.1 | Wheat | golgi | 97.85 | 98.4 |
| TraesCS6D01G171800.1 | Wheat | golgi, unclear | 97.73 | 98.29 |
| HORVU6Hr1G039140.3 | Barley | cytosol | 97.51 | 97.84 |
| Zm00001d018547_P001 | Maize | cytosol | 10.66 | 90.38 |
| Os02t0218200-01 | Rice | plasma membrane, plastid | 86.96 | 87.36 |
| EES04750 | Sorghum | cytosol | 85.6 | 85.7 |
| Zm00001d016373_P003 | Maize | plastid | 84.47 | 84.76 |
| Zm00001d047903_P001 | Maize | cytosol | 8.62 | 84.44 |
| Zm00001d053711_P001 | Maize | cytosol | 8.62 | 84.44 |
| Zm00001d012310_P001 | Maize | cytosol | 10.88 | 72.18 |
| Zm00001d036958_P001 | Maize | cytosol | 11.34 | 68.03 |
| TraesCS4A01G294100.1 | Wheat | cytosol | 60.88 | 59.53 |
| TraesCS5A01G194300.1 | Wheat | cytosol | 49.09 | 56.75 |
| TraesCS5A01G194200.1 | Wheat | golgi | 56.46 | 54.01 |
| TraesCS5A01G194100.3 | Wheat | plasma membrane | 56.24 | 53.8 |
| TraesCS5A01G474300.1 | Wheat | cytosol | 11.45 | 16.48 |
Protein Annotations
| Gene3D:1.10.390.60 | Gene3D:1.25.50.20 | MapMan:19.4.5.6.5 | Gene3D:2.60.40.1730 | Gene3D:2.60.40.1910 | InterPro:ERAP1-like_C_dom |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008237 | GO:GO:0008270 | GO:GO:0016787 | GO:GO:0019538 | InterPro:M1_APN-typ | PFAM:PF01433 |
| PFAM:PF11838 | PRINTS:PR00756 | PANTHER:PTHR11533 | PANTHER:PTHR11533:SF183 | InterPro:Peptidase_M1 | InterPro:Peptidase_M1_N |
| SUPFAM:SSF55486 | SUPFAM:SSF63737 | EnsemblPlantsGene:TraesCS6A01G182500 | EnsemblPlants:TraesCS6A01G182500.1 | TIGR:cd09601 | SEG:seg |
Description
No Description!
Coordinates
chr6A:+:210792278..210800061
Molecular Weight (calculated)
98606.8 Da
IEP (calculated)
4.954
GRAVY (calculated)
-0.066
Length
882 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAELEQSAE HFRGQARLPG FAAPRRYDLL LTPDLAACTF AGSVSVDVDV ATPTRFLVLN AADLDVSPGD VHFAPKGSGQ VLLPVEVTSA LEDEILIIRF
101: NEVLPVGEGT LVIAFQGTLN DKMKGFYRSV YELNGEKKNM AVTQFEPADA RRCFPCWDEP SFKAVFKITL DVPSETVALS NMPVVEEKVN GPTKTVYFQE
201: SPIMSTYLVA VIVGMFDYVE AFTADGTSVR VYTQVGKSAQ GKFALEVAVK TLILFKEYFA VPYPLPKMDM IAIPDFASGA MENYGLVTYR ETALLFDEQH
301: SAAANKQRVA VVVAHELAHQ WFGNLVTMEW WTHLWLNEGF ATWVSYLAAD RFFPEWNVWI QFLEESTTGF RLDALAGSHP IEVDVNHVDE IDEIFDAISY
401: RKGAAVIRML QSYLGAEIFQ KSLAAYIKRF AYSNAKTEDL WAALEEGSGE PVKTLMHSWT KQQGYPVVSV KLKDGKLELE QTQFLSSGSE GVGQWVVPIT
501: LCCCSYSVQQ KFLFRGKQED FNLSGLVECQ KKDDFWIKLN VDQTGFYRVS YDEELASRLR HAVETNILSA ADRYGVLDDT YALCMAGKQK LVTLLHLIAA
601: YKNETEYTVL AHAINTSLSI YEMMAVAAPE ELVNMKKFLI DFLEPFAQRV GWDAKGGEGH LNALLRGTLL TALAELGHQA TIEEAVRRFN VFLEDRETPL
701: LPPDVRKAAY VALMQTVNKS NKSGYESLLK IYRETDLSQE KVRVLGSLAS SPDPDVVCEA LNFLLSSEVR NQDCIFVLRG VTAAAHEVAW TWLKENWDYI
801: AETFTGHLLT YFITVTVSPL ATDEKGDEAE EFFKSRTKAS IARTVKQSIE RVRIKAKWVK STKGEADLGN VLKELAHKHS DG
101: NEVLPVGEGT LVIAFQGTLN DKMKGFYRSV YELNGEKKNM AVTQFEPADA RRCFPCWDEP SFKAVFKITL DVPSETVALS NMPVVEEKVN GPTKTVYFQE
201: SPIMSTYLVA VIVGMFDYVE AFTADGTSVR VYTQVGKSAQ GKFALEVAVK TLILFKEYFA VPYPLPKMDM IAIPDFASGA MENYGLVTYR ETALLFDEQH
301: SAAANKQRVA VVVAHELAHQ WFGNLVTMEW WTHLWLNEGF ATWVSYLAAD RFFPEWNVWI QFLEESTTGF RLDALAGSHP IEVDVNHVDE IDEIFDAISY
401: RKGAAVIRML QSYLGAEIFQ KSLAAYIKRF AYSNAKTEDL WAALEEGSGE PVKTLMHSWT KQQGYPVVSV KLKDGKLELE QTQFLSSGSE GVGQWVVPIT
501: LCCCSYSVQQ KFLFRGKQED FNLSGLVECQ KKDDFWIKLN VDQTGFYRVS YDEELASRLR HAVETNILSA ADRYGVLDDT YALCMAGKQK LVTLLHLIAA
601: YKNETEYTVL AHAINTSLSI YEMMAVAAPE ELVNMKKFLI DFLEPFAQRV GWDAKGGEGH LNALLRGTLL TALAELGHQA TIEEAVRRFN VFLEDRETPL
701: LPPDVRKAAY VALMQTVNKS NKSGYESLLK IYRETDLSQE KVRVLGSLAS SPDPDVVCEA LNFLLSSEVR NQDCIFVLRG VTAAAHEVAW TWLKENWDYI
801: AETFTGHLLT YFITVTVSPL ATDEKGDEAE EFFKSRTKAS IARTVKQSIE RVRIKAKWVK STKGEADLGN VLKELAHKHS DG
001: MDQFKGEPRL PKFAVPKRYD LRLNPDLIAC TFTGTVAIDL DIVADTRFIV LNAADLSVND ASVSFTPPSS SKALAAPKVV LFEEDEILVL EFGEILPHGV
101: GVLKLGFNGV LNDKMKGFYR STYEHNGEKK NMAVTQFEPA DARRCFPCWD EPACKATFKI TLEVPTDLVA LSNMPIMEEK VNGNLKIVSY QESPIMSTYL
201: VAIVVGLFDY VEDHTSDGIK VRVYCQVGKA DQGKFALHVG AKTLDLFKEY FAVPYPLPKM DMIAIPDFAA GAMENYGLVT YRETALLYDE QHSAASNKQR
301: VATVVAHELA HQWFGNLVTM EWWTHLWLNE GFATWVSYLA TDSLFPEWKI WTQFLDESTE GLRLDGLEES HPIEVEVNHA AEIDEIFDAI SYRKGASVIR
401: MLQSYLGAEV FQKSLAAYIK NHAYSNAKTE DLWAALEAGS GEPVNKLMSS WTKQKGYPVV SAKIKDGKLE LEQSRFLSSG SPGEGQWIVP VTLCCGSYEK
501: RKNFLLESKS GAYDLKELLG CSIADGSDKI NGTCSWIKIN VDQAGFYRVK YDDSLAAGLR NATESQSLTS IDRYGILDDS FALTMARQQS LASLLTLCSA
601: YKKELDYTVL SNLIAISYKV VKIGADANQE LMSGIKHFFI GVFQFAAGKL GWDPKQGESH LDAMLRGEVL TALAVFGHDE TLKEAVRRFD AFLADRNTPL
701: LPPDIRRAAY VAVMQRANKS DKSGYESLLR VYRETDLSQE KTRILGSLAS CPDPTIVQDV LNFVLSDEVR NQDALYGLSG VSWEGREVAW KWLQEKWEYI
801: GNTWGSGFLI TRFISAVVSP FASFEKAKEV EEFFATRSKP SMARTLKQSI ERVHINANWV ESIKKEDNLT QLVAQLSSN
101: GVLKLGFNGV LNDKMKGFYR STYEHNGEKK NMAVTQFEPA DARRCFPCWD EPACKATFKI TLEVPTDLVA LSNMPIMEEK VNGNLKIVSY QESPIMSTYL
201: VAIVVGLFDY VEDHTSDGIK VRVYCQVGKA DQGKFALHVG AKTLDLFKEY FAVPYPLPKM DMIAIPDFAA GAMENYGLVT YRETALLYDE QHSAASNKQR
301: VATVVAHELA HQWFGNLVTM EWWTHLWLNE GFATWVSYLA TDSLFPEWKI WTQFLDESTE GLRLDGLEES HPIEVEVNHA AEIDEIFDAI SYRKGASVIR
401: MLQSYLGAEV FQKSLAAYIK NHAYSNAKTE DLWAALEAGS GEPVNKLMSS WTKQKGYPVV SAKIKDGKLE LEQSRFLSSG SPGEGQWIVP VTLCCGSYEK
501: RKNFLLESKS GAYDLKELLG CSIADGSDKI NGTCSWIKIN VDQAGFYRVK YDDSLAAGLR NATESQSLTS IDRYGILDDS FALTMARQQS LASLLTLCSA
601: YKKELDYTVL SNLIAISYKV VKIGADANQE LMSGIKHFFI GVFQFAAGKL GWDPKQGESH LDAMLRGEVL TALAVFGHDE TLKEAVRRFD AFLADRNTPL
701: LPPDIRRAAY VAVMQRANKS DKSGYESLLR VYRETDLSQE KTRILGSLAS CPDPTIVQDV LNFVLSDEVR NQDALYGLSG VSWEGREVAW KWLQEKWEYI
801: GNTWGSGFLI TRFISAVVSP FASFEKAKEV EEFFATRSKP SMARTLKQSI ERVHINANWV ESIKKEDNLT QLVAQLSSN
Arabidopsis Description
APM1Aminopeptidase [Source:UniProtKB/TrEMBL;Acc:A0A178UWR6]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.