Factsheet for Os08t0398700-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 2
plasma membrane 3
nucleus 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G017700.2	Wheat	golgi	86.97	87.37
KXG25106	Sorghum	plasma membrane	86.4	86.3
Zm00001d032282_P012	Maize	plasma membrane	85.49	85.39
TraesCS4A01G294100.1	Wheat	cytosol	86.74	84.15
TraesCS4B01G020000.1	Wheat	plastid	86.63	83.66
HORVU4Hr1G003100.1	Barley	plastid	86.74	83.31
Os09t0362500-01	Rice	plasma membrane	72.69	73.1
Os02t0218200-01	Rice	plasma membrane, plastid	62.17	61.96
Os09t0362800-02	Rice	cytosol	27.31	61.28
KRH61543	Soybean	cytosol	4.34	43.18
VIT_04s0008g05980.t01	Wine grape	cytosol	7.43	40.37
Os03t0819100-01	Rice	cytosol, plasma membrane, plastid	10.74	15.38

Protein Annotations

Gene3D:1.10.390.60	Gene3D:1.25.50.20	MapMan:19.4.5.6.5	Gene3D:2.60.40.1730	Gene3D:2.60.40.1910	EntrezGene:4345501
EMBL:AK120068	ProteinID:BAC99372.1	ProteinID:BAC99434.1	ProteinID:BAF23660.1	ProteinID:BAT05325.1	InterPro:ERAP1-like_C_dom
GO:GO:0003674	GO:GO:0003824	GO:GO:0004177	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0008237	GO:GO:0008270	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020
GO:GO:0016787	GO:GO:0019538	GO:GO:0031090	GO:GO:0042277	GO:GO:0043171	GO:GO:0043231
GO:GO:0046872	GO:GO:0070006	MEROPS:M01.A25	InterPro:M1_APN-typ	EnsemblPlantsGene:Os08g0398700	EnsemblPlants:Os08t0398700-01
PFAM:PF01433	PFAM:PF11838	PRINTS:PR00756	PANTHER:PTHR11533	PANTHER:PTHR11533:SF183	InterPro:Peptidase_M1
InterPro:Peptidase_M1_N	UniProt:Q0J5V5	SUPFAM:SSF55486	SUPFAM:SSF63737	UniParc:UPI0000DD9504	RefSeq:XP_015649943.1
SEG:seg	:	:	:	:	:

Description

Peptidase M1, membrane alanine aminopeptidase family protein. (Os08t0398700-01);Similar to APM1 (AMINOPEPTIDASE M1). (Os08t0398700-02)

Coordinates

chr8:+:19021817..19031571

Molecular Weight (calculated)

97908.7 Da

IEP (calculated)

5.031

GRAVY (calculated)

-0.151

Length

875 amino acids

Sequence
(BLAST)

001: MAASPEQFRG QARLPRCASP LSYDLRLRPD LAACAFSGSA AVAVAVSAPT RFLVLNAAEL AVDGSSVRFQ DLVPSEVVQF EEDEIVVIGF GQDLPIGEGV
101: LKMDFTGTLN DQMRGFYRSK YEYKGESRNM AVTQFEAADA RRCFPCWDEP AFKAKFKLTL EVPSELVALS NMPVIKETVH GPLKTVYYEE SPLMSTYLVA
201: IVVGLFDYIE GSTLEGTKVR VYTQVGKSNQ GKFALDVAVK SLDLFKDYFA TPYPLPKLDM VAIPDFAAGA MENYGLVTYR ETALLYDELL SSASNKQQVA
301: ITVAHELAHQ WFGNLVTMEW WTHLWLNEGF ASWVSYLAVE ALFPEWNNWT QFLDETTSGL RLDALAESHP IEVDINHASE IDAIFDSISY DKGASVIRML
401: QSYLGAERFQ KALASYIKKY AYSNAKTEDL WAVLEEESGE PVKDLMTTWT KQQGYPVIYA KLDGHDLHLE QAQFLSDGSS GPGLWIVPIT SCCGSYDAQK
501: KFLLKGKTDK VHIDLTASQN AGGEKGENCW IKLNVDQTGF YRVKYDDELA AGLEKAIKAN KLSLMDKIGI VEDSYSLSVA RKQTLTSLLR LLNAYRNESD
601: YTVLSHVTSV CLGIDKISVD ATPELSRDIK QLLINLLLSA AKTLGWDPKE GESHLDVMLR SLLLIALVKL GHDETINEGV RRFHIFIKDR KTNILPPDTR
701: KASYLAVMRT VTTSSRAGYD ALLKIYRETA EAQEKSRILG SLSSCLDKDI VLEALNFMLT DEVRNQDAFY VLGGISLEGR EVAWAWLKEN WDHVLKTWPS
801: SSLISDFVKS TVSRFTTEEK AAEVSEFFAG KTKPSFERAL KQSLERVRIS ARWIESIRSE PNLAQTVNEL LQHDM

Best Arabidopsis Sequence Match ( AT4G33090.1 )
(BLAST)

001: MDQFKGEPRL PKFAVPKRYD LRLNPDLIAC TFTGTVAIDL DIVADTRFIV LNAADLSVND ASVSFTPPSS SKALAAPKVV LFEEDEILVL EFGEILPHGV
101: GVLKLGFNGV LNDKMKGFYR STYEHNGEKK NMAVTQFEPA DARRCFPCWD EPACKATFKI TLEVPTDLVA LSNMPIMEEK VNGNLKIVSY QESPIMSTYL
201: VAIVVGLFDY VEDHTSDGIK VRVYCQVGKA DQGKFALHVG AKTLDLFKEY FAVPYPLPKM DMIAIPDFAA GAMENYGLVT YRETALLYDE QHSAASNKQR
301: VATVVAHELA HQWFGNLVTM EWWTHLWLNE GFATWVSYLA TDSLFPEWKI WTQFLDESTE GLRLDGLEES HPIEVEVNHA AEIDEIFDAI SYRKGASVIR
401: MLQSYLGAEV FQKSLAAYIK NHAYSNAKTE DLWAALEAGS GEPVNKLMSS WTKQKGYPVV SAKIKDGKLE LEQSRFLSSG SPGEGQWIVP VTLCCGSYEK
501: RKNFLLESKS GAYDLKELLG CSIADGSDKI NGTCSWIKIN VDQAGFYRVK YDDSLAAGLR NATESQSLTS IDRYGILDDS FALTMARQQS LASLLTLCSA
601: YKKELDYTVL SNLIAISYKV VKIGADANQE LMSGIKHFFI GVFQFAAGKL GWDPKQGESH LDAMLRGEVL TALAVFGHDE TLKEAVRRFD AFLADRNTPL
701: LPPDIRRAAY VAVMQRANKS DKSGYESLLR VYRETDLSQE KTRILGSLAS CPDPTIVQDV LNFVLSDEVR NQDALYGLSG VSWEGREVAW KWLQEKWEYI
801: GNTWGSGFLI TRFISAVVSP FASFEKAKEV EEFFATRSKP SMARTLKQSI ERVHINANWV ESIKKEDNLT QLVAQLSSN

Arabidopsis Description

APM1Aminopeptidase [Source:UniProtKB/TrEMBL;Acc:A0A178UWR6]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.