CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032282_P012	Maize	plasma membrane	95.55	95.55
TraesCS4D01G017700.2	Wheat	golgi	86.19	86.68
Os08t0398700-01	Rice	plasma membrane	86.3	86.4
TraesCS4A01G294100.1	Wheat	cytosol	85.39	82.93
TraesCS4B01G020000.1	Wheat	plastid	85.73	82.89
HORVU4Hr1G003100.1	Barley	plastid	85.84	82.55
KXG35481	Sorghum	plastid	70.55	61.13
EES04750	Sorghum	cytosol	61.07	60.73
KRH61543	Soybean	cytosol	4.34	43.18
VIT_04s0008g05980.t01	Wine grape	cytosol	7.42	40.37
EER93198	Sorghum	cytosol	11.3	16.2

Protein Annotations

Gene3D:1.10.390.60	Gene3D:1.25.50.20	MapMan:19.4.5.6.5	Gene3D:2.60.40.1730	Gene3D:2.60.40.1910	UniProt:A0A1B6PHE0
ncoils:Coil	InterPro:ERAP1-like_C_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004177	GO:GO:0005488
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008237	GO:GO:0008270
GO:GO:0016787	GO:GO:0019538	GO:GO:0046872	EnsemblPlants:KXG25106	ProteinID:KXG25106	ProteinID:KXG25106.1
InterPro:M1_APN-typ	PFAM:PF01433	PFAM:PF11838	PRINTS:PR00756	PANTHER:PTHR11533	PANTHER:PTHR11533:SF183
InterPro:Peptidase_M1	InterPro:Peptidase_M1_N	EnsemblPlantsGene:SORBI_3007G120800	SUPFAM:SSF55486	SUPFAM:SSF63737	UniParc:UPI00081AB74C
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:52149043..52158606

Molecular Weight (calculated)

98370.0 Da

IEP (calculated)

4.733

GRAVY (calculated)

-0.170

Length

876 amino acids

Sequence
(BLAST)

001: MAASPDQFRG QARLPRFAAP LRYDLRLRPD LAACTFTGAA AVAVAVSATT RFLVLNAAEL DVDRASIRFQ DLAPTDVAQF EEDEILVIGF DRDLPLGEGV
101: LTMDFTGTLN DQMRGFYRSK YLYNGESRNM AVTQFEAADA RRCFPCWDDP AFKAKFKLTL EVPSDLVALS NMPVAKETVS GSIKTVYYEE SPLMSTYLVA
201: IVVGIFDYIE SSTSEGTKVR VYTQVGKTNQ GKFALDVAVK SLDLYKDYFA TPYPLPKLDM IAIPDFSAGA MENYGLVTYR DTALLYDELL SSASNKQQVA
301: ITVAHELAHQ WFGNLVTMEW WTHLWLNEGF ASWVSYLAVE SLFPEWNNWT QFLDETTSGL KLDALAESHP IEVEVNHASE IDAIFDSISY DKGASVIRML
401: QSYLGAERFQ KALASYIKKY AYSNAKTEDL WAVLEEESGE PVKDLMTTWT KQQGYPVIYA KINGHDLELE QAQFLSDGSS GPGMWIVPVT SCCGSYDAQK
501: KFLLKDKTDK INIKEFAASQ SADGEKNQNI WIKLNIDQTG FYRVKYDDEL AAGLVNAIKA KKLSLMDKIG IVEDSYALSV ACKQTLTSLL RLLNAYNDES
601: DYTVLSHVTS VCLSISKITV DATPDLNKDI KQLLINLLLP AAIKLGWDPK DGESHLDVML RSLLLTAMVR LGHNETINEG VRRFQIFFED RKTSLLPPDT
701: RKAAYLAVMR TVSTSNRSGY DALLKIYREA SEPQEKSRVL GSLSSSPDKD IVLEALNFMF TDEVRNQDSF YILGGISLEG REVAWTWLKE NWDYVLKTWK
801: SSSLISDFIE SIVPPFTSEE KATEVTEFFA GRIKPSFERA LKQSLERVRI SVRWIQSIRS EPKLGETVQE LLQAEA

Best Arabidopsis Sequence Match ( AT4G33090.1 )
(BLAST)

001: MDQFKGEPRL PKFAVPKRYD LRLNPDLIAC TFTGTVAIDL DIVADTRFIV LNAADLSVND ASVSFTPPSS SKALAAPKVV LFEEDEILVL EFGEILPHGV
101: GVLKLGFNGV LNDKMKGFYR STYEHNGEKK NMAVTQFEPA DARRCFPCWD EPACKATFKI TLEVPTDLVA LSNMPIMEEK VNGNLKIVSY QESPIMSTYL
201: VAIVVGLFDY VEDHTSDGIK VRVYCQVGKA DQGKFALHVG AKTLDLFKEY FAVPYPLPKM DMIAIPDFAA GAMENYGLVT YRETALLYDE QHSAASNKQR
301: VATVVAHELA HQWFGNLVTM EWWTHLWLNE GFATWVSYLA TDSLFPEWKI WTQFLDESTE GLRLDGLEES HPIEVEVNHA AEIDEIFDAI SYRKGASVIR
401: MLQSYLGAEV FQKSLAAYIK NHAYSNAKTE DLWAALEAGS GEPVNKLMSS WTKQKGYPVV SAKIKDGKLE LEQSRFLSSG SPGEGQWIVP VTLCCGSYEK
501: RKNFLLESKS GAYDLKELLG CSIADGSDKI NGTCSWIKIN VDQAGFYRVK YDDSLAAGLR NATESQSLTS IDRYGILDDS FALTMARQQS LASLLTLCSA
601: YKKELDYTVL SNLIAISYKV VKIGADANQE LMSGIKHFFI GVFQFAAGKL GWDPKQGESH LDAMLRGEVL TALAVFGHDE TLKEAVRRFD AFLADRNTPL
701: LPPDIRRAAY VAVMQRANKS DKSGYESLLR VYRETDLSQE KTRILGSLAS CPDPTIVQDV LNFVLSDEVR NQDALYGLSG VSWEGREVAW KWLQEKWEYI
801: GNTWGSGFLI TRFISAVVSP FASFEKAKEV EEFFATRSKP SMARTLKQSI ERVHINANWV ESIKKEDNLT QLVAQLSSN

Arabidopsis Description

APM1Aminopeptidase [Source:UniProtKB/TrEMBL;Acc:A0A178UWR6]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.