Factsheet for VIT_04s0008g05980.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
golgi 2
cytosol 2
plastid 1
extracellular 2
endoplasmic reticulum 1
vacuole 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	extracellular, plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G076900.2	Wheat	cytosol, mitochondrion, plasma membrane, plastid	36.02	11.67
VIT_09s0002g01900.t01	Wine grape	cytosol	47.2	8.59
TraesCS5A01G194300.1	Wheat	cytosol	40.37	8.52
GSMUA_Achr6P35860_001	Banana	plasma membrane	40.99	7.83
TraesCS5D01G083200.1	Wheat	plasma membrane	36.65	7.61
TraesCS1D01G442200.1	Wheat	plasma membrane	36.02	7.53
VIT_04s0008g01430.t01	Wine grape	cytosol, plasma membrane, plastid	40.99	7.5
TraesCS4D01G017700.2	Wheat	golgi	40.37	7.46
Os08t0398700-01	Rice	plasma membrane	40.37	7.43
Zm00001d032282_P012	Maize	plasma membrane	40.37	7.42
KXG25106	Sorghum	plasma membrane	40.37	7.42
Os09t0362500-01	Rice	plasma membrane	39.75	7.36
TraesCS4A01G294100.1	Wheat	cytosol	40.37	7.21
HORVU4Hr1G003100.1	Barley	plastid	40.37	7.14
HORVU5Hr1G057330.19	Barley	mitochondrion	38.51	7.09
TraesCS4B01G020000.1	Wheat	plastid	39.75	7.06
TraesCS5A01G194100.3	Wheat	plasma membrane	40.37	7.05
TraesCS5A01G194200.1	Wheat	golgi	40.37	7.05
TraesCS5B01G189500.1	Wheat	plasma membrane	40.37	7.03
Zm00001d020225_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	40.37	7.02
TraesCS5D01G196500.1	Wheat	plasma membrane	39.75	6.96
TraesCS5D01G196600.1	Wheat	plasma membrane	39.75	6.93
TraesCS5B01G189600.1	Wheat	extracellular, plasma membrane	39.13	6.81
KXG35481	Sorghum	plastid	40.37	6.43
HORVU5Hr1G057350.1	Barley	plastid	7.45	5.53
HORVU5Hr1G057380.3	Barley	mitochondrion, plastid, vacuole	8.07	4.5
VIT_13s0067g03300.t01	Wine grape	cytosol	16.15	4.26
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	5.59	2.54
Os09t0362800-02	Rice	cytosol	1.86	0.77
VIT_17s0000g09920.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	0.62	0.28
KRH61543	Soybean	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.1740.60	Gene3D:2.60.40.380	MapMan:35.1	ProteinID:CBI21090	ProteinID:CBI21090.3	UniProt:D7SUZ1
EMBL:FN595231	GO:GO:0003674	GO:GO:0003824	GO:GO:0003993	GO:GO:0005488	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008237	GO:GO:0008270	GO:GO:0009987	GO:GO:0016311
GO:GO:0016787	GO:GO:0019538	GO:GO:0046872	InterPro:IPR008963	MEROPS:M01.A25	PFAM:PF01433
PFAM:PF16656	PANTHER:PTHR11533	PANTHER:PTHR11533:SF177	InterPro:Peptidase_M1	InterPro:Peptidase_M1_N	InterPro:Purple_acid_Pase-like_N
InterPro:Purple_acid_Pase_N	SUPFAM:SSF49363	SUPFAM:SSF55486	UniParc:UPI0001BE1ABC	ArrayExpress:VIT_04s0008g05980	EnsemblPlantsGene:VIT_04s0008g05980
EnsemblPlants:VIT_04s0008g05980.t01	:	:	:	:	:

Description

No Description!

Coordinates

chr4:-:5676559..5681200

Molecular Weight (calculated)

18080.5 Da

IEP (calculated)

6.269

GRAVY (calculated)

-0.204

Length

161 amino acids

Sequence
(BLAST)

001: MSTYLVAVVG LFDHIEDKTA DGINVRAYCP IGKADQGKFA LDVTVKTLDM YTEHFSMPYP LPKLDMAAVP YFSGCAKENF GLIIFCEIEL LHHELHSGAS
101: CKHAKGNVTN YTLYKYISGY IHHCIIDGLE HDTKYYYKIG EGGSSHESWF QTPPKIDPDA H

Best Arabidopsis Sequence Match ( AT4G33090.1 )
(BLAST)

001: MDQFKGEPRL PKFAVPKRYD LRLNPDLIAC TFTGTVAIDL DIVADTRFIV LNAADLSVND ASVSFTPPSS SKALAAPKVV LFEEDEILVL EFGEILPHGV
101: GVLKLGFNGV LNDKMKGFYR STYEHNGEKK NMAVTQFEPA DARRCFPCWD EPACKATFKI TLEVPTDLVA LSNMPIMEEK VNGNLKIVSY QESPIMSTYL
201: VAIVVGLFDY VEDHTSDGIK VRVYCQVGKA DQGKFALHVG AKTLDLFKEY FAVPYPLPKM DMIAIPDFAA GAMENYGLVT YRETALLYDE QHSAASNKQR
301: VATVVAHELA HQWFGNLVTM EWWTHLWLNE GFATWVSYLA TDSLFPEWKI WTQFLDESTE GLRLDGLEES HPIEVEVNHA AEIDEIFDAI SYRKGASVIR
401: MLQSYLGAEV FQKSLAAYIK NHAYSNAKTE DLWAALEAGS GEPVNKLMSS WTKQKGYPVV SAKIKDGKLE LEQSRFLSSG SPGEGQWIVP VTLCCGSYEK
501: RKNFLLESKS GAYDLKELLG CSIADGSDKI NGTCSWIKIN VDQAGFYRVK YDDSLAAGLR NATESQSLTS IDRYGILDDS FALTMARQQS LASLLTLCSA
601: YKKELDYTVL SNLIAISYKV VKIGADANQE LMSGIKHFFI GVFQFAAGKL GWDPKQGESH LDAMLRGEVL TALAVFGHDE TLKEAVRRFD AFLADRNTPL
701: LPPDIRRAAY VAVMQRANKS DKSGYESLLR VYRETDLSQE KTRILGSLAS CPDPTIVQDV LNFVLSDEVR NQDALYGLSG VSWEGREVAW KWLQEKWEYI
801: GNTWGSGFLI TRFISAVVSP FASFEKAKEV EEFFATRSKP SMARTLKQSI ERVHINANWV ESIKKEDNLT QLVAQLSSN

Arabidopsis Description

APM1Aminopeptidase [Source:UniProtKB/TrEMBL;Acc:A0A178UWR6]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.