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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, vacuole

Predictor Summary:
  • plastid 1
  • vacuole 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU5Hr1G057350.1 Barley plastid 72.66 96.77
HORVU5Hr1G057330.19 Barley mitochondrion 70.93 23.43
TraesCS5B01G189600.1 Wheat extracellular, plasma membrane 68.86 21.51
TraesCS5D01G196600.1 Wheat plasma membrane 68.51 21.45
TraesCS5D01G196500.1 Wheat plasma membrane 67.47 21.22
TraesCS5A01G194100.3 Wheat plasma membrane 67.47 21.15
TraesCS5B01G189500.1 Wheat plasma membrane 67.47 21.1
TraesCS5A01G194200.1 Wheat golgi 67.13 21.04
Os09t0362500-01 Rice plasma membrane 56.75 18.85
Zm00001d020225_P002 Maize endoplasmic reticulum, plasma membrane, vacuole 55.02 17.17
HORVU4Hr1G003100.1 Barley plastid 53.29 16.9
KXG35481 Sorghum plastid 56.06 16.02
HORVU6Hr1G039140.3 Barley cytosol 46.37 15.24
TraesCS5A01G194300.1 Wheat cytosol 33.22 12.58
VIT_04s0008g05980.t01 Wine grape cytosol 4.5 8.07
HORVU0Hr1G014070.1 Barley cytosol, plasma membrane, plastid 10.73 5.63
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid 3.46 2.82
HORVU5Hr1G112530.1 Barley extracellular 2.42 1.7
KRH61543 Soybean cytosol 0.35 1.14
Os09t0362800-02 Rice cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:HORVU5Hr1G057380.3EnsemblPlantsGene:HORVU5Hr1G057380Gene3D:2.60.40.1730GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008237GO:GO:0008270GO:GO:0016787
GO:GO:0019538InterPro:Peptidase_M1InterPro:Peptidase_M1_NPANTHER:PTHR11533PANTHER:PTHR11533:SF203PRINTS:PR00756
SEG:segSUPFAM:SSF63737UniParc:UPI000B484189UniProt:A0A287RCL9MapMan:35.1:
Description
No Description!
Coordinates
chrchr5H:+:450180158..450181798
Molecular Weight (calculated)
26086.8 Da
IEP (calculated)
8.957
GRAVY (calculated)
0.153
Length
289 amino acids
Sequence
(BLAST)
001: AGGEAEQFRG KARLPSFAAP RRYELSLRPD LVACTFSGSV AISVAVSAPT RFLVLNALDL TVNRASILFQ ALAPTEVVFF KDDGVLVLGF AKQLPLGEGV
101: LKMDFDGILN DQMRGFYRSK YQFKGKEKNM AVTQFESVDA RRCFPCWDEP AFKAKFKLTL EVPSQLVALS NMPVANATFA GPIKTVRYHE SPPMSTYLVA
201: IVVGIFEYVE GMTSKGTSSV SDIIRSKCCM IPFSXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXVGII
Best Arabidopsis Sequence Match ( AT4G33090.1 )
(BLAST)
001: MDQFKGEPRL PKFAVPKRYD LRLNPDLIAC TFTGTVAIDL DIVADTRFIV LNAADLSVND ASVSFTPPSS SKALAAPKVV LFEEDEILVL EFGEILPHGV
101: GVLKLGFNGV LNDKMKGFYR STYEHNGEKK NMAVTQFEPA DARRCFPCWD EPACKATFKI TLEVPTDLVA LSNMPIMEEK VNGNLKIVSY QESPIMSTYL
201: VAIVVGLFDY VEDHTSDGIK VRVYCQVGKA DQGKFALHVG AKTLDLFKEY FAVPYPLPKM DMIAIPDFAA GAMENYGLVT YRETALLYDE QHSAASNKQR
301: VATVVAHELA HQWFGNLVTM EWWTHLWLNE GFATWVSYLA TDSLFPEWKI WTQFLDESTE GLRLDGLEES HPIEVEVNHA AEIDEIFDAI SYRKGASVIR
401: MLQSYLGAEV FQKSLAAYIK NHAYSNAKTE DLWAALEAGS GEPVNKLMSS WTKQKGYPVV SAKIKDGKLE LEQSRFLSSG SPGEGQWIVP VTLCCGSYEK
501: RKNFLLESKS GAYDLKELLG CSIADGSDKI NGTCSWIKIN VDQAGFYRVK YDDSLAAGLR NATESQSLTS IDRYGILDDS FALTMARQQS LASLLTLCSA
601: YKKELDYTVL SNLIAISYKV VKIGADANQE LMSGIKHFFI GVFQFAAGKL GWDPKQGESH LDAMLRGEVL TALAVFGHDE TLKEAVRRFD AFLADRNTPL
701: LPPDIRRAAY VAVMQRANKS DKSGYESLLR VYRETDLSQE KTRILGSLAS CPDPTIVQDV LNFVLSDEVR NQDALYGLSG VSWEGREVAW KWLQEKWEYI
801: GNTWGSGFLI TRFISAVVSP FASFEKAKEV EEFFATRSKP SMARTLKQSI ERVHINANWV ESIKKEDNLT QLVAQLSSN
Arabidopsis Description
APM1Aminopeptidase [Source:UniProtKB/TrEMBL;Acc:A0A178UWR6]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.