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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 3
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU5Hr1G057350.1 Barley plastid 23.77 95.85
TraesCS5A01G194300.1 Wheat cytosol 80.23 92.01
TraesCS5A01G194200.1 Wheat golgi 92.11 87.42
TraesCS5D01G196600.1 Wheat plasma membrane 92.0 87.22
TraesCS5D01G196500.1 Wheat plasma membrane 91.54 87.16
TraesCS5A01G194100.3 Wheat plasma membrane 91.77 87.09
TraesCS5B01G189600.1 Wheat extracellular, plasma membrane 91.89 86.92
TraesCS5B01G189500.1 Wheat plasma membrane 91.31 86.47
Os09t0362500-01 Rice plasma membrane 77.03 77.47
HORVU5Hr1G057380.3 Barley mitochondrion, plastid, vacuole 23.43 70.93
Zm00001d020225_P002 Maize endoplasmic reticulum, plasma membrane, vacuole 74.4 70.3
Os09t0362800-02 Rice cytosol 30.63 68.72
HORVU4Hr1G003100.1 Barley plastid 70.51 67.73
KXG35481 Sorghum plastid 74.63 64.59
HORVU6Hr1G039140.3 Barley cytosol 56.34 56.09
KRH61543 Soybean cytosol 3.89 38.64
VIT_04s0008g05980.t01 Wine grape cytosol 7.09 38.51
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid 14.97 36.9
HORVU0Hr1G014070.1 Barley cytosol, plasma membrane, plastid 10.29 16.33
HORVU5Hr1G112530.1 Barley extracellular 7.31 15.53
Protein Annotations
Gene3D:1.10.390.60Gene3D:1.25.50.20MapMan:19.4.5.6.5Gene3D:2.60.40.1730Gene3D:2.60.40.1910UniProt:A0A287RCB0
InterPro:ERAP1-like_C_domGO:GO:0003674GO:GO:0003824GO:GO:0004177GO:GO:0005488GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0008237GO:GO:0008270GO:GO:0016787
GO:GO:0019538GO:GO:0046872EnsemblPlantsGene:HORVU5Hr1G057330EnsemblPlants:HORVU5Hr1G057330.19InterPro:M1_APN-typPFAM:PF01433
PFAM:PF11838PRINTS:PR00756PANTHER:PTHR11533PANTHER:PTHR11533:SF203InterPro:Peptidase_M1InterPro:Peptidase_M1_N
SUPFAM:SSF55486SUPFAM:SSF63737UniParc:UPI000B46B04DSEG:seg::
Description
Aminopeptidase [Source:UniProtKB/TrEMBL;Acc:A0A287RCB0]
Coordinates
chrchr5H:-:450087439..450137965
Molecular Weight (calculated)
98038.1 Da
IEP (calculated)
9.091
GRAVY (calculated)
-0.155
Length
875 amino acids
Sequence
(BLAST)
001: SRALSTRKRA EQFRGKARLP SFAAPRRYEL SLRPDLVACT FSGSVAISVA VSAPTRFLVL NALDLTVNRA SILFQALAPT EVVFFKDDGV LVLGFAKQLP
101: LGEGVLKMDF DGILNDQMRG FYRSKYQFKG KEKNMAVTQF ESVDARRCFP CWDEPAFKAK FKLTLEVPSQ LVALSNMPVA NATFAGPIKT VRYHESPPMS
201: TYLVAIVVGI FEYVEGMTSK GTRVRVYTQI GNSNQGKFAL DVGVKSLNFY KDYFDTPYPL PKLDMIAIPD FAAGAMENYG LVTYREVALL FDEKSSSASS
301: KQNIAITVAH ELAHQWFGNL VTMEWWTHLW LNEGFATWMS HLAVDSFFPQ WNIWTQFLDS TTTALRLDSL EASHPIEVEI HHASEVDQIF DAISYDKGAS
401: VIRMLQSYLG AERFQKAMAS YMKKYAYSNA KTEDLWAVLE KETGEPVKDL MTTWTKQKGY PVINAKIKGN DIEIEQAQFL LDGSSGPGTW IVPITSGCGA
501: PGVQKKLLKL ERDKLVISSQ CGDRKKGGNF WTKLNINGTG FYRIKYDDEL AAALQNALET KKLSLMDKIG IVDDVYALSI ARQQTFASLL RLLYGYRGEA
601: DYSVLSHINT VTTSIAKISV DATPALAGDI KQLLIKILLS PAEKLGWDPK KGESHLDVML RPVLLTALVH LGHGKTINEG VRRFNIFTHD RNTPLLPPDT
701: RKAAYLAVMQ NVSSSNRSGY DVLRKIYKES AEGEERLQVL GILCSCLDKG IVLESMNLIF TNEVRNQDAY IVLKGILPEA REISWNWLKE NWERISKTFS
801: TSSRVADFVK TIVPLFTSNE KAVEISNFFA TRTKPGFERT LKQNLENVRI SARWAEGIKS EPGLAQTVRE LLDKP
Best Arabidopsis Sequence Match ( AT4G33090.1 )
(BLAST)
001: MDQFKGEPRL PKFAVPKRYD LRLNPDLIAC TFTGTVAIDL DIVADTRFIV LNAADLSVND ASVSFTPPSS SKALAAPKVV LFEEDEILVL EFGEILPHGV
101: GVLKLGFNGV LNDKMKGFYR STYEHNGEKK NMAVTQFEPA DARRCFPCWD EPACKATFKI TLEVPTDLVA LSNMPIMEEK VNGNLKIVSY QESPIMSTYL
201: VAIVVGLFDY VEDHTSDGIK VRVYCQVGKA DQGKFALHVG AKTLDLFKEY FAVPYPLPKM DMIAIPDFAA GAMENYGLVT YRETALLYDE QHSAASNKQR
301: VATVVAHELA HQWFGNLVTM EWWTHLWLNE GFATWVSYLA TDSLFPEWKI WTQFLDESTE GLRLDGLEES HPIEVEVNHA AEIDEIFDAI SYRKGASVIR
401: MLQSYLGAEV FQKSLAAYIK NHAYSNAKTE DLWAALEAGS GEPVNKLMSS WTKQKGYPVV SAKIKDGKLE LEQSRFLSSG SPGEGQWIVP VTLCCGSYEK
501: RKNFLLESKS GAYDLKELLG CSIADGSDKI NGTCSWIKIN VDQAGFYRVK YDDSLAAGLR NATESQSLTS IDRYGILDDS FALTMARQQS LASLLTLCSA
601: YKKELDYTVL SNLIAISYKV VKIGADANQE LMSGIKHFFI GVFQFAAGKL GWDPKQGESH LDAMLRGEVL TALAVFGHDE TLKEAVRRFD AFLADRNTPL
701: LPPDIRRAAY VAVMQRANKS DKSGYESLLR VYRETDLSQE KTRILGSLAS CPDPTIVQDV LNFVLSDEVR NQDALYGLSG VSWEGREVAW KWLQEKWEYI
801: GNTWGSGFLI TRFISAVVSP FASFEKAKEV EEFFATRSKP SMARTLKQSI ERVHINANWV ESIKKEDNLT QLVAQLSSN
Arabidopsis Description
APM1Aminopeptidase [Source:UniProtKB/TrEMBL;Acc:A0A178UWR6]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.